Evidence map›Paper›PMID 29491013›Full record

ArticleJournal of clinical microbiology2018

Phylogenetic Characterization of Salmonella enterica Serovar Typhimurium and Its Monophasic Variant Isolated from Food Animals in Japan Revealed Replacement of Major Epidemic Clones in the Last 4 Decades.

Nobuo Arai, Tsuyoshi Sekizuka, Yukino Tamamura, Kiyoshi Tanaka, Lisa Barco, Hidemasa Izumiya, Masahiro Kusumoto, Atsushi Hinenoya, Shinji Yamasaki, Taketoshi Iwata and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 58 citations in OpenAlex.

  1. Effects ofMicroorganisms · 2026
    Article
  2. Article
  3. Localization of the origin of transfer for Salmonella genomic island 4 from Salmonella enterica serovar I 4,[5],12:i:.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025
    Article
  4. Serovars and Antimicrobial Resistance ofPathogens (Basel, Switzerland) · 2025
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  5. Article
  6. Applied and environmental microbiology · 2025
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  15. The Occurrence and Genomic Characteristics ofFoods (Basel, Switzerland) · 2022
    Article
  16. Development of Geraniol-Loaded Liposomal Nanoformulations againstJournal of agricultural and food chemistry · 2022
    Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Nobuo AraiGraduate School of Life and Environmental Sciences, Osaka Prefecture University, Izumisano, Osaka, Japan.
Tsuyoshi SekizukaPathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Yukino TamamuraDivision of Bacterial and Parasitic Disease, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.
Kiyoshi TanakaHokkaido Research Station, National Institute of Animal Health, Sapporo, Hokkaido, Japan.
Lisa BarcoReference Laboratory for Salmonella, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Padua, Italy.
Hidemasa IzumiyaDepartment of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.ORCID 0000-0002-9797-7402
Masahiro KusumotoKyushu Research Station, National Institute of Animal Health, Kagoshima, Japan.
Atsushi HinenoyaGraduate School of Life and Environmental Sciences, Osaka Prefecture University, Izumisano, Osaka, Japan.
Shinji YamasakiGraduate School of Life and Environmental Sciences, Osaka Prefecture University, Izumisano, Osaka, Japan.
Taketoshi IwataDivision of Bacterial and Parasitic Disease, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.
Ayako WatanabeDivision of Bacterial and Parasitic Disease, National Institute of Animal Health, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.
Makoto KurodaPathogen Genomics Center, National Institute of Infectious Diseases, Tokyo, Japan.
Ikuo UchidaUnit of Veterinary Bacteriology, Department of Pathology, School of Veterinary Medicine, Rakuno Gakuen University, Ebetsu, Hokkaido, Japan.
Masato AkibaGraduate School of Life and Environmental Sciences, Osaka Prefecture University, Izumisano, Osaka, Japan akiba@affrc.go.jp.
National Agriculture and Food Research Organization · JPNational Institute of Infectious Diseases · JPNational Institute of Animal Health · JPOsaka Prefecture University · JPIstituto Zooprofilattico Sperimentale delle Venezie · ITRakuno Gakuen University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

PhylogenyAnimalsCattleDNA, BacterialGenome, BacterialGenotypeJapanMeatMolecular EpidemiologyPolymorphism, Single NucleotidePrevalenceSalmonella Infections, AnimalSalmonella typhimuriumSequence Analysis, DNASwineWhole Genome SequencingDNA, Bacterialfood animalJapanmonophasic variantpandemicphylogenySalmonella entericaTyphimurium

Identifiers

PMID29491013
PMCPMC5925715
OpenAlexW2794656897

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.