Evidence map›Paper›PMID 29489655›Full record

Observational studyMedicine2018

Genome-wide association study of maternal genetic effects and parent-of-origin effects on food allergy.

Xin Liu, Xiumei Hong, Hui-Ju Tsai, Karen K Mestan, Min Shi, Amira Kefi, Ke Hao, Qi Chen, Guoying Wang, Deanna Caruso and 12 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Update on the genetics of allergic diseases.The Journal of allergy and clinical immunology · 2025
    Review
  3. Review
  4. Review
  5. Multi-omics profiling approach in food allergy.The World Allergy Organization journal · 2023
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. The Phenotype of the Food-Allergic Patient.Immunology and allergy clinics of North America · 2021
    Review
  11. Review
  12. Article
  13. Current insights into the genetics of food allergy.The Journal of allergy and clinical immunology · 2021
    Review
  14. Article
  15. Article
  16. Advances in asthma and allergic disease genetics: Is bigger always better?The Journal of allergy and clinical immunology · 2019
    Review
  17. Article
  18. [Research advances in influencing factors for immune tolerance to food allergens in children].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 10 institutions in 3 countries.

Xin LiuKey Laboratory of Genomic and Precision Medicine, China Gastrointestinal Cancer Research Center, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China Mary Ann and J. Milburn Smith Child Health Research Program, Stanley Manne Children's Research Institute, Ann and Robert H. Lurie Children's Hospital of Chicago Department of Pediatrics Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL University of Chinese Academy of Sciences, Beijing, China Department of Population, Family and Reproductive Health, Center on the Early Life Origins of Disease, Johns Hopkins University Bloomberg School of Public Health, Baltimore, MD Division of Biostatistics and Bioinformatics, Institute of Population Health Sciences, National Health Research Institutes, Zhunan Department of Public Health, China Medical University, Taichung, Taiwan Division of Neonatology, Ann and Robert H. Lurie Children's Hospital of Chicago, Chicago, IL Biostatistics Branch, NIEHS, NIH, DHHS, Research Triangle Park, NC Department of Bioinformatics, the University of Illinois at Chicago, Chicago, IL Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY Center for Intestinal and Liver Inflammation Research, Stanley Manne Children's Research Institute Division of Allergy and Immunology, Ann and Robert H. Lurie Children's Hospital of Chicago, Chicago, IL Department of Cardiovascular Internal Medicine, State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Disease, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing Department of Epidemiology and Health Statistics, School of Public Health, Zhejiang University, Hangzhou, Zhejiang, China Division of Allergy-Immunology, Northwestern University Feinberg School of Medicine, Chicago, IL Departments of Human Genetics and Biostatistics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA Division of General Pediatrics and Adolescent Medicine, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, MD.
Xiumei Hong
Hui-Ju Tsai
Karen K Mestan
Min Shi
Amira Kefi
Ke Hao
Qi Chen
Guoying Wang
Deanna Caruso
Hua Geng
Yufeng Gao
Jianlin He
Rajesh Kumar
Hongjian Wang
Yunxian Yu
Tami Bartell
Xiao-Di Tan
Robert P Schleimer
Daniel E Weeks
Jacqueline A Pongracic
Xiaobin Wang
Lurie Children's Hospital · USJohns Hopkins University · USBeijing Institute of Genomics · CNChina Medical University · TWIcahn School of Medicine at Mount Sinai · USJohns Hopkins Medicine · USNorthwestern University · USTriangle · USUniversity of Illinois Chicago · USUniversity of Pittsburgh · US

Funding

Systems Genetics Approach to Gene Discovery in Chronic RhinosinusitisU19AI106683 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SCHLEIMER, ROBERT P · 2014 to 2017
$7.9M
Glucocorticosteroid Action In Inflammatory DiseaseR37HL068546 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SCHLEIMER, ROBERT P · 2009 to 2018
$3.5M
Preservation of mucosal barrier in surgical diseasesR01DK064240 · NIDDK · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI TAN, XIAO-DI · 2004 to 2014
$3.0M
Post Genome-Wide Association Study of Food AllergyU01AI090727 · NIAID · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI WANG, XIAOBIN · 2010 to 2014
$2.3M
Genome-Wide Association Study of Food AllergyR56AI080627 · NIAID · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI WANG, XIAOBIN · 2009 to 2010
$1.3M
Oxidant Stress and Gene Polymorphisms in Bronchopulmonary DysplasiaK23HL093302 · NHLBI · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI MESTAN, KAREN K · 2010 to 2013
$538k
Establishing Precursors of Food Allergy in NewbornsR21AI079872 · NIAID · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI WANG, XIAOBIN · 2008 to 2009
$447k
Parent-of-Origin Effects on Food AllergyR03AI105294 · NIAID · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI PONGRACIC, JACQUELINE · 2013 to 2014
$147k
NHLBI NIH HHS K23 HL093302NHLBI NIH HHS R37 HL068546NIAID NIH HHS R03 AI105294NIAID NIH HHS R21 AI079872NIAID NIH HHS R56 AI080627NIAID NIH HHS U01 AI090727NIAID NIH HHS U19 AI106683NIDDK NIH HHS R01 DK064240
6 · The paper itself

Abstract

Previous genetic studies of food allergy (FA) have mainly focused on inherited genotypic effects. The role of parental genotypic effects remains largely unexplored. Leveraging existing genome-wide association study (GWAS) data generated from the Chicago Food Allergy Study, we examined maternal genotypic and parent-of-origin (PO) effects using multinomial likelihood ratio tests in 588 complete and incomplete Caucasian FA trios. We identified 1 single nucleotide polymorphism with significant (P < 5×10) maternal effect on any FA (rs4235235), which is located in a noncoding RNA (LOC101927947) with unknown function. We also identified 3 suggestive (P < 5×10) loci with maternal genetic effects: 1 for any FA (rs976078, in a gene desert region on 13q31.1) and 2 for egg allergy (rs1343795 and rs4572450, in the ZNF652 gene, where genetic variants have been associated with atopic dermatitis). Three suggestive loci with PO effect were observed: 1 for peanut allergy (rs4896888 in the ADGB gene) and 2 for any FA in boys only (rs1036504 and rs2917750 in the IQCE gene). Findings from this family-based GWAS of FA provided some preliminary evidence on maternal genotypic or PO effects on FA. Additional family-based studies are needed to confirm our findings and gain new insight into maternal and paternal genetic contribution to FA.

Indexed as

Genome-Wide Association StudyGenomic ImprintingFathersFemaleFood HypersensitivityGenotypeHumansMaleMothersPolymorphism, Single Nucleotide

Identifiers

PMID29489655
PMCPMC5851764
OpenAlexW2793339622

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.