ArticleG3 (Bethesda, Md.)2018
Transcriptome Analysis of
Article in G3 (Bethesda, Md.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
12 citing papers in PubMed.
- Transcription Factors Are Involved in Wizened Bud Occurrence During the Growing Season in theEpigenomes · 2024Article
- Comparative transcriptomic analysis of transcription factors and hormones during flower bud differentiation in 'Red Globe' grape under red‒blue light.Scientific reports · 2023Article
- Transcriptome analysis of critical genes related to flowering in Mikania micrantha at different altitudes provides insights for a potential control.BMC genomics · 2023Article
- Significant increases in Donghong kiwifruit yield by a novel umbrella-shaped trellis system and identification of associated molecular mechanisms.Frontiers in plant science · 2023Article
- Morpho-histology, endogenous hormone dynamics, and transcriptome profiling inFrontiers in plant science · 2022Article
- Transcriptomic Insight into Underground Floral Differentiation inBioMed research international · 2022Article
- Insights into the Major Metabolites Involved in the Underground Floral Differentiation ofBioMed research international · 2022Article
- The role of salicylic acid in plant flower development.Forestry research · 2022Review
- Article
- Article
- Ectopic Expression ofG3 (Bethesda, Md.) · 2019Article
- The Effects of Endogenous Hormones on the Flowering and Fruiting ofPlants (Basel, Switzerland) · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
background
resultsThis study obtained 160.88 Gbp of clean data that were assembled into 100,072 unigenes, and a total of 38,658 unigenes were annotated. A total of 27,521 simple sequence repeats (SSRs) were identified after scanning the assembled transcriptome, and the mono-nucleotide repeats were predominant, followed by di-nucleotide and tri-nucleotide repeats. A total of 12,559 differentially expressed genes (DEGs) were detected from the female (F) and male (M) floral bud comparisons. The gene ontology (GO) databases revealed that these DEGs were primarily contained in "metabolic processes", "cellular processes", and "single-organism processes". The Kyoto Encyclopedia of Genes and Genomes (KEGG) databases suggested that the DEGs belonged to "plant hormone signal transduction" and accounted for a relatively large portion in all of these comparisons. We analyzed the expression level of plant hormone-related genes and detected the contents of several relevant plant hormones in different stages. The results revealed that the dynamic changes in each hormone content were almost consistent with the expression levels of relevant genes. The transcription factors selected from the DEGs were analyzed. Most DEGs of MADS-box were upregulated and most DEGs of bZIP were downregulated. The expression trends of the DEGs were nearly identical in female and male floral buds, and qRT-PCR analysis revealed consistency with the transcriptome data.
conclusionsWe sequenced and assembled a high-quality
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.