Evidence map›Paper›PMID 29487085›Full record

ArticleEMBO reports2018

The deubiquitinating enzyme USP20 stabilizes ULK1 and promotes autophagy initiation.

Jun Hwan Kim, Dongyeob Seo, Sun-Jick Kim, Dong Wook Choi, Jin Seok Park, Jihoon Ha, Jungwon Choi, Ji-Hyung Lee, Su Myung Jung, Kyoung-Wan Seo and 5 more

Abstract read
In one paragraph

Article in EMBO reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Ubiquitination in the regulation of autophagy.Acta biochimica et biophysica Sinica · 2023
    Article
  19. Review
  20. A review of deubiquitinases and thier roles in tumorigenesis and development.Frontiers in bioengineering and biotechnology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Jun Hwan KimDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Dongyeob SeoDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Sun-Jick KimDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Dong Wook ChoiDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Jin Seok ParkDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Jihoon HaDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Jungwon ChoiDivision of Cancer Biology, Research Institute, National Cancer Center, Goyang, Korea.
Ji-Hyung LeeDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Su Myung JungDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Kyoung-Wan SeoDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Eun-Woo LeeDivision of Biomedical Science, Korea Research Institute of Bioscience & Biotechnology, Daejeon, Korea.ORCID 0000-0002-5156-0003
Youn Sook LeeDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea.
Heesun CheongDivision of Cancer Biology, Research Institute, National Cancer Center, Goyang, Korea.
Cheol Yong ChoiDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea choicy@skku.ac.kr parks@skku.edu.ORCID 0000-0002-6946-268X
Seok Hee ParkDepartment of Biological Sciences, Sungkyunkwan University, Suwon, Korea choicy@skku.ac.kr parks@skku.edu.ORCID 0000-0002-6210-4927
Sungkyunkwan University · KRNational Cancer Center · KRKorea Research Institute of Bioscience and Biotechnology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy begins with the formation of autophagosomes, a process that depends on the activity of the serine/threonine kinase ULK1 (hATG1). Although earlier studies indicated that ULK1 activity is regulated by dynamic polyubiquitination, the deubiquitinase involved in the regulation of ULK1 remained unknown. In this study, we demonstrate that ubiquitin-specific protease 20 (USP20) acts as a positive regulator of autophagy initiation through stabilizing ULK1. At basal state, USP20 binds to and stabilizes ULK1 by removing the ubiquitin moiety, thereby interfering with the lysosomal degradation of ULK1. The stabilization of basal ULK1 protein levels is required for the initiation of starvation-induced autophagy, since the depletion of USP20 by RNA interference inhibits LC3 puncta formation, a marker of autophagic flux. At later stages of autophagy, USP20 dissociates from ULK1, resulting in enhanced ULK1 degradation and apoptosis. Taken together, our findings provide the first evidence that USP20 plays a crucial role in autophagy initiation by maintaining the basal expression level of ULK1.

Indexed as

AutophagyAnimalsAutophagy-Related Protein-1 HomologCell LineCell SurvivalGene ExpressionHEK293 CellsHumansLysosomesMiceProtein BindingProtein StabilityProteolysisRNA InterferenceRNA, Small InterferingUbiquitinationAutophagy-Related Protein-1 HomologRNA, Small InterferingUbiquitin ThiolesteraseUSP20 protein, humanautophagydeubiquitinaselysosomal degradationULK1USP20

Identifiers

PMID29487085
PMCPMC5891421
OpenAlexW2789208839

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.