Evidence map›Paper›PMID 29486767›Full record

ArticleParasites & vectors2018

HDP2: a ribosomal DNA (NTS-ETS) sequence as a target for species-specific molecular diagnosis of intestinal taeniasis in humans.

María D Flores, Luis M Gonzalez, Carolina Hurtado, Yamileth Monje Motta, Cristina Domínguez-Hidalgo, Francisco Jesús Merino, María J Perteguer, Teresa Gárate

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

María D FloresParasitology Department, Centro Nacional de Microbiología, Instituto de Salud Carlos III, Crtra, Majadahonda-Pozuelo, km 2.2, 28220, Majadahonda, Madrid, Spain. mflores@externos.isciii.es.
Luis M GonzalezParasitology Department, Centro Nacional de Microbiología, Instituto de Salud Carlos III, Crtra, Majadahonda-Pozuelo, km 2.2, 28220, Majadahonda, Madrid, Spain.
Carolina HurtadoParasitology Department, Centro Nacional de Microbiología, Instituto de Salud Carlos III, Crtra, Majadahonda-Pozuelo, km 2.2, 28220, Majadahonda, Madrid, Spain.
Yamileth Monje MottaPrograma de Medicina, Facultad de Salud, Universidad del Magdalena, 47004, Santa Marta D.T.C.H, Colombia.
Cristina Domínguez-HidalgoParasitology Department, Centro Nacional de Microbiología, Instituto de Salud Carlos III, Crtra, Majadahonda-Pozuelo, km 2.2, 28220, Majadahonda, Madrid, Spain.
Francisco Jesús MerinoMicrobiología, Hospital Universitario Severo Ochoa, 28911, Leganés, Madrid, Spain.
María J PerteguerParasitology Department, Centro Nacional de Microbiología, Instituto de Salud Carlos III, Crtra, Majadahonda-Pozuelo, km 2.2, 28220, Majadahonda, Madrid, Spain.
Teresa GárateParasitology Department, Centro Nacional de Microbiología, Instituto de Salud Carlos III, Crtra, Majadahonda-Pozuelo, km 2.2, 28220, Majadahonda, Madrid, Spain. tgarate@isciii.es.
Instituto de Salud Carlos III · ESCentro Nacional de Microbiologia · ESHospital Universitario Severo Ochoa · ESUniversidad San Pablo CEU · ESUniversity of Magdalena · CO

Funding

AESI MPY1279/15MINECO AGL2014-56193-RNetwork of Biomedical Research on Tropical Diseases (RICET) RD12/0018/0001Network of Biomedical Research on Tropical Diseases (RICET) RD12/0018/0011
6 · The paper itself

Abstract

backgroundTaenia solium, T. asiatica and T. saginata tapeworms cause human taeniasis and are the origin of porcine and bovine cysticercosis. Furthermore, T. solium eggs can cause human cysticercosis, with neurocysticercosis being the most serious form of the disease. These helminth infections are neglected tropical diseases and are endemic in several countries in the Americas, Asia and Africa. As a result of globalization, migration in particular, the infections have been extending to non-endemic territories. Species-specific diagnosis of taeniasis is subject to drawbacks that could be resolved using molecular approaches. In the present study, conventional and real-time amplification protocols (cPCR and qPCR) based on the T. saginata HDP2 sequence were applied in the differential diagnosis of taeniasis (T. saginata, T. solium) in both fecal samples and proglottids expelled by patients. The HDP2 homolog in T. solium was cloned and characterized.

resultsSemi-nested cPCR and qPCR (Sn-HDP2 cPCR and Sn-HDP2 qPCR) amplified T. saginata and T. solium DNA, with an analytical sensitivity of 40 and 400 fg, respectively, and identically in both protocols. Eighteen taeniasis patients were diagnosed directly with T. saginata or T. solium, either from proglottids or fecal samples with/without eggs (detected using microscopy), based on the optimized Sn-HDP2 qPCR. After cloning, the T. solium HDP2 homolog sequence was confirmed to be a ribosomal sequence. The HDP2 fragment corresponded to a non-transcribed sequence/external transcribed repeat (NTS/ETS) of ribosomal DNA. Compared with the T. saginata HDP2 homolog, the T solium HDP2 sequence lacked the first 900 nt at the 5' end and showed nucleotide substitutions and small deletions.

conclusionsSn-HDP2 cPCR and Sn-HDP2 qPCR were set up for the diagnosis of human taeniasis, using proglottids and fecal samples from affected patients. The new Sn-HDP2 qPCR protocol was the best option, as it directly differentiated T. saginata from T. solium. The diagnosis of an imported T. solium-taeniasis case and nine European T. saginata cases was relevant. Finally, the cloning and sequencing of the T. solium HDP2 fragment confirmed that HDP2 was part of a ribosomal unit.

Indexed as

AdolescentAdultAfricaAnimalsAsiaCysticercosisDiagnosis, DifferentialDNA, HelminthDNA, RibosomalFecesFemaleHumansIntestinesMaleMiddle AgedMolecular Diagnostic TechniquesDNA, HelminthDNA, RibosomalcPCRDiagnosisqPCRRibosomal DNATaenia saginataTaeniasisTaenia solium

Identifiers

PMID29486767
PMCPMC6389257
OpenAlexW2796995960

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.