Evidence map›Paper›PMID 29485393›Full record

ArticleMicrobiology (Reading, England)2018

Transcription factor VdCmr1 is required for pigment production, protection from UV irradiation, and regulates expression of melanin biosynthetic genes in Verticillium dahliae.

Yonglin Wang, Xiaoping Hu, Yulin Fang, Amy Anchieta, Polly H Goldman, Gustavo Hernandez, Steven J Klosterman

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Journal of fungi (Basel, Switzerland) · 2025
    Article
  7. Review
  8. Regulation of melanin production in fungi.Frontiers in fungal biology · 2025
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Influence ofFoods (Basel, Switzerland) · 2023
    Article
  17. Article
  18. Article
  19. Deciphering the Role of PIG1 and DHN-Melanin inJournal of fungi (Basel, Switzerland) · 2023
    Article
  20. Frontiers in microbiology · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Yonglin WangCollege of Forestry, Beijing Forestry University, Beijing, PR China.
Xiaoping HuDepartment of Plant Pathology, College of Plant Protection, Northwest A&F University, Yangling, PR China.
Yulin FangCollege of Forestry, Beijing Forestry University, Beijing, PR China.
Amy AnchietaUnited States Department of Agriculture, Agricultural Research Service, 1636 E. Alisal St., Salinas, CA 93905, USA.
Polly H GoldmanUnited States Department of Agriculture, Agricultural Research Service, 1636 E. Alisal St., Salinas, CA 93905, USA.
Gustavo HernandezUnited States Department of Agriculture, Agricultural Research Service, 1636 E. Alisal St., Salinas, CA 93905, USA.
Steven J KlostermanUnited States Department of Agriculture, Agricultural Research Service, 1636 E. Alisal St., Salinas, CA 93905, USA.
Agricultural Research Service · USBeijing Forestry University · CNUnited States Department of Agriculture · USNorthwest A&F University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Verticillium dahliae is a soilborne fungus that causes vascular wilt diseases on numerous plant species worldwide. The production of darkly melanized microsclerotia is crucial in the disease cycle of V. dahliae, as these structures allow for long-term survival in soil. Previously, transcriptomic and genomic analysis identified a cluster of genes in V. dahliae that encodes some dihydroxynaphthalene (DHN) melanin biosynthetic pathway homologues found in related fungi. In this study, we explored the roles of cluster-specific transcription factor VdCmr1, as well as two other genes within the cluster encoding a polyketide synthase (VdPKS1) and a laccase (VdLac1), enzymes at initial and endpoint steps in DHN melanin production. The results revealed that VdCmr1 and VdPKS1 are required for melanin production, but neither is required for microsclerotia production. None of the three genes were required for pathogenesis on tobacco and lettuce. Exposure of ΔVdCmr1 and wild-type strains to UV irradiation, or to high temperature (40 °C), revealed an approx. 50 % reduction of survival in the ΔVdCmr1 strain, relative to the wild-type strain, in response to either condition. Expression profiles revealed that expression of some melanin biosynthetic genes are in part dependent on VdCmr1. Combined data indicate VdCmr1 is a key regulator of melanin biosynthesis, and that via regulation of melanogenesis, VdCmr1 affects survival of V. dahliae in response to abiotic threats. We conclude with a model showing regulation of VdCmr1 by a high osmolarity glycerol response (Hog)-type MAP kinase pathway.

Indexed as

Gene Expression Regulation, FungalFungal ProteinsGene DeletionLaccaseMelaninsModels, BiologicalNaphtholsPlant DiseasesPolyketide SynthasesTemperatureTranscription FactorsUltraviolet RaysVerticillium1,8-dihydroxynaphthalene melaninFungal ProteinsLaccaseMelaninsNaphtholsPolyketide SynthasesTranscription FactorsDHNfungimelaninpathogenicitypigmentregulation

Identifiers

PMID29485393
PMCPMC5982140
OpenAlexW2788463145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.