Evidence map›Paper›PMID 29483360›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2018

Peptide-MHC Class I Tetramers Can Fail To Detect Relevant Functional T Cell Clonotypes and Underestimate Antigen-Reactive T Cell Populations.

Cristina Rius, Meriem Attaf, Katie Tungatt, Valentina Bianchi, Mateusz Legut, Amandine Bovay, Marco Donia, Per Thor Straten, Mark Peakman, Inge Marie Svane and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 84 citations in OpenAlex.

  1. Review
  2. SPRED2 Negatively Regulates CD8Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Unbiased avidity-based isolation of antigen-specific T cells.Journal for immunotherapy of cancer · 2026
    Article
  7. Article
  8. Newly identified oncolytic VSV-GP-specific CD8Molecular therapy. Oncology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Low-affinity CD8American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2024
    Article
  16. De novo identification of CD4Nature methods · 2024
    Article
  17. Review
  18. Article
  19. What's the Catch? The Significance of Catch Bonds in T Cell Activation.Journal of immunology (Baltimore, Md. : 1950) · 2023
    Review
  20. Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 4 countries.

Cristina RiusDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.
Meriem AttafDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.
Katie TungattDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.
Valentina BianchiDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.
Mateusz LegutDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.
Amandine BovayDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.ORCID 0000-0002-3680-7637
Marco DoniaCentre for Cancer Immune Therapy, Herlev University Hospital, DK-2730 Herlev, Denmark.ORCID 0000-0003-4966-9752
Per Thor StratenCentre for Cancer Immune Therapy, Herlev University Hospital, DK-2730 Herlev, Denmark.
Mark PeakmanDepartment of Immunobiology, Guy's Hospital, King's College London, London SE1 9RT, United Kingdom.
Inge Marie SvaneCentre for Cancer Immune Therapy, Herlev University Hospital, DK-2730 Herlev, Denmark.
Sascha OttDepartment of Computer Science, University of Warwick, Coventry CV4 7AL, United Kingdom.
Tom ConnorSystems Immunity Research Institute, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom; and.ORCID 0000-0003-2394-6504
Barbara SzomolayDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.
Garry DoltonDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom.ORCID 0000-0002-6332-9108
Andrew K SewellDivision of Infection and Immunity, Cardiff University School of Medicine, University Hospital Wales, Cardiff CF14 4XN, United Kingdom; sewellak@cardiff.ac.uk.ORCID 0000-0003-3194-3135
University Hospital of Wales · GBHerlev Hospital · DKGuy's Hospital · GBUniversity of Warwick · GB

Funding

Wellcome Trust 100327
6 · The paper itself

Abstract

Peptide-MHC (pMHC) multimers, usually used as streptavidin-based tetramers, have transformed the study of Ag-specific T cells by allowing direct detection, phenotyping, and enumeration within polyclonal T cell populations. These reagents are now a standard part of the immunology toolkit and have been used in many thousands of published studies. Unfortunately, the TCR-affinity threshold required for staining with standard pMHC multimer protocols is higher than that required for efficient T cell activation. This discrepancy makes it possible for pMHC multimer staining to miss fully functional T cells, especially where low-affinity TCRs predominate, such as in MHC class II-restricted responses or those directed against self-antigens. Several recent, somewhat alarming, reports indicate that pMHC staining might fail to detect the majority of functional T cells and have prompted suggestions that T cell immunology has become biased toward the type of cells amenable to detection with multimeric pMHC. We use several viral- and tumor-specific pMHC reagents to compare populations of human T cells stained by standard pMHC protocols and optimized protocols that we have developed. Our results confirm that optimized protocols recover greater populations of T cells that include fully functional T cell clonotypes that cannot be stained by regular pMHC-staining protocols. These results highlight the importance of using optimized procedures that include the use of protein kinase inhibitor and Ab cross-linking during staining to maximize the recovery of Ag-specific T cells and serve to further highlight that many previous quantifications of T cell responses with pMHC reagents are likely to have considerably underestimated the size of the relevant populations.

Indexed as

CD8-Positive T-LymphocytesCytomegalovirusHerpesvirus 4, HumanHLA-A2 AntigenHumansLymphocyte ActivationLymphocytes, Tumor-InfiltratingMelanomaOrthomyxoviridaeProtein BindingProtein Kinase InhibitorsReceptors, Antigen, T-CellRNA-Binding ProteinsStaining and LabelingTumor Cells, CulturedHLA-A2 AntigenIGF2BP2 protein, humanProtein Kinase InhibitorsReceptors, Antigen, T-CellRNA-Binding Proteins

Identifiers

PMID29483360
PMCPMC5857646
OpenAlexW2788334670

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.