Evidence map›Paper›PMID 29481689›Full record

ArticleNucleic acids research2018

Human RAD51 rapidly forms intrinsically dynamic nucleoprotein filaments modulated by nucleotide binding state.

Mário Špírek, Jarmila Mlcoušková, Ondrej Belán, Máté Gyimesi, Gábor M Harami, Eszter Molnár, Jiri Novacek, Mihály Kovács, Lumir Krejci

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 48 citations in OpenAlex.

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  8. Rtt105 stimulates Rad51-ssDNA assembly and orchestrates Rad51 and RPA actions to promote homologous recombination repair.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  9. Article
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  11. Structure of RADX and mechanism for regulation of RAD51 nucleofilaments.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Mário ŠpírekDepartment of Biology, Masaryk University, Brno 62500, Czech Republic.
Jarmila MlcouškováDepartment of Biology, Masaryk University, Brno 62500, Czech Republic.
Ondrej BelánDepartment of Biology, Masaryk University, Brno 62500, Czech Republic.
Máté GyimesiDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
Gábor M HaramiDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
Eszter MolnárDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
Jiri NovacekCEITEC, Masaryk University, Brno, Czech Republic.
Mihály KovácsDepartment of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
Lumir KrejciDepartment of Biology, Masaryk University, Brno 62500, Czech Republic.
Eötvös Loránd University · HUMasaryk University · CZCentral European Institute of Technology – Masaryk University · CZSt. Anne's University Hospital Brno · CZUniversity Hospital Brno · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Formation of RAD51 filaments on single-stranded DNA is an essential event during homologous recombination, which is required for homology search, strand exchange and protection of replication forks. Formation of nucleoprotein filaments (NF) is required for development and genomic stability, and its failure is associated with developmental abnormalities and tumorigenesis. Here we describe the structure of the human RAD51 NFs and of its Walker box mutants using electron microscopy. Wild-type RAD51 filaments adopt an 'open' conformation when compared to a 'closed' structure formed by mutants, reflecting alterations in helical pitch. The kinetics of formation/disassembly of RAD51 filaments show rapid and high ssDNA coverage via low cooperativity binding of RAD51 units along the DNA. Subsequently, a series of isomerization or dissociation events mediated by nucleotide binding state creates intrinsically dynamic RAD51 NFs. Our findings highlight important a mechanistic divergence among recombinases from different organisms, in line with the diversity of biological mechanisms of HR initiation and quality control. These data reveal unexpected intrinsic dynamic properties of the RAD51 filament during assembly/disassembly, which may be important for the proper control of homologous recombination.

Indexed as

Adenine NucleotidesAdenosine TriphosphateBinding SitesBiological EvolutionCryoelectron MicroscopyDNA, Single-StrandedHumansKineticsModels, MolecularMutationRad51 RecombinaseAdenine NucleotidesAdenosine TriphosphateDNA, Single-StrandedRAD51 protein, humanRad51 Recombinase

Identifiers

PMID29481689
PMCPMC5934667
OpenAlexW2789492275

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.