Evidence map›Paper›PMID 29481671›Full record

ArticleBrain : a journal of neurology2018

Mechanistic basis of an epistatic interaction reducing age at onset in hereditary spastic paraplegia.

Timothy Newton, Rachel Allison, James R Edgar, Jennifer H Lumb, Catherine E Rodger, Paul T Manna, Tania Rizo, Zacharias Kohl, Anders O H Nygren, Larissa Arning and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Brain : a journal of neurology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. A GJA1 Variant Triggers Earlier SPG4 Onset by Destabilizing Deubiquitinase VCPIP1 to Lower SPASTIN Levels.Movement disorders : official journal of the Movement Disorder Society · 2026
    Article
  3. Article
  4. Review
  5. Review
  6. PLP1 gene mutations cause spastic paraplegia type 2 in three families.Annals of clinical and translational neurology · 2023
    Article
  7. Article
  8. A novel truncating variant ofFrontiers in neurology · 2022
    Article
  9. The Role of Spastin in Axon Biology.Frontiers in cell and developmental biology · 2022
    Review
  10. A novel mutation in theFrontiers in genetics · 2022
    Article
  11. Review
  12. Therapeutic Strategies for MutantBrain sciences · 2021
    Review
  13. Article
  14. Review
  15. Article
  16. The complex activities of the SET1/MLL complex core subunits in development and disease.Biochimica et biophysica acta. Gene regulatory mechanisms · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 4 countries.

Timothy NewtonDepartment of Medical Genetics and Cambridge Institute for Medical Research, University of Cambridge, UK.
Rachel AllisonDepartment of Medical Genetics and Cambridge Institute for Medical Research, University of Cambridge, UK.
James R EdgarDepartment of Clinical Biochemistry and Cambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, UK.
Jennifer H LumbDepartment of Medical Genetics and Cambridge Institute for Medical Research, University of Cambridge, UK.
Catherine E RodgerDepartment of Medical Genetics and Cambridge Institute for Medical Research, University of Cambridge, UK.
Paul T MannaDepartment of Clinical Biochemistry and Cambridge Institute for Medical Research, University of Cambridge, Cambridge CB2 0XY, UK.
Tania RizoDepartment of Stem Cell Biology, Friedrich-Alexander University Erlangen-Nuernberg (FAU), Erlangen, Germany.
Zacharias KohlDepartment of Molecular Neurology, Friedrich-Alexander University Erlangen-Nuernberg (FAU), Erlangen, Germany.
Anders O H NygrenMRC-Holland, Amsterdam, The Netherlands.
Larissa ArningDepartment of Human Genetics, Ruhr-University, Bochum, Germany.
Rebecca SchüleCenter for Neurology and Hertie Institute for Clinical Brain Research, Eberhard-Karls-University, 72076 Tübingen, Germany.
Christel DepienneICM Brain and Spine Institute, INSERM U1127, CNRS UMR7225, Sorbonne Universites, UPMC Univ Paris VI UMR_S1127, Paris, France.
Lisa GoldbergDepartment of Clinical Chemistry and Laboratory Diagnostics, Jena University Hospital, Jena, Germany.
Christiane FrahmHans Berger Department of Neurology, Jena University Hospital, Jena, Germany.
Giovanni StevaninICM Brain and Spine Institute, INSERM U1127, CNRS UMR7225, Sorbonne Universites, UPMC Univ Paris VI UMR_S1127, Paris, France.
Alexandra DurrICM Brain and Spine Institute, INSERM U1127, CNRS UMR7225, Sorbonne Universites, UPMC Univ Paris VI UMR_S1127, Paris, France.
Ludger SchölsCenter for Neurology and Hertie Institute for Clinical Brain Research, Eberhard-Karls-University, 72076 Tübingen, Germany.
Beate WinnerDepartment of Molecular Neurology, Friedrich-Alexander University Erlangen-Nuernberg (FAU), Erlangen, Germany.
Christian BeetzDepartment of Clinical Chemistry and Laboratory Diagnostics, Jena University Hospital, Jena, Germany.
Evan ReidDepartment of Medical Genetics and Cambridge Institute for Medical Research, University of Cambridge, UK.
University of Cambridge · GBCentre National de la Recherche Scientifique · FRFriedrich-Alexander-Universität Erlangen-Nürnberg · DEJena University Hospital · DEGerman Center for Neurodegenerative Diseases · DEMRC Holland (Netherlands) · NLRuhr University Bochum · DE

Funding

GENOME STUDIES IN HEREDITARY SPASTIC PARAPLEGIA - beyond the exomeR01NS072248 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Stephan Zuchner · 2011 to 2026
$9.2M
Medical Research Council G0800117Medical Research Council MR/M00046X/1NINDS NIH HHS R01 NS072248Wellcome TrustWellcome Trust 082381Wellcome Trust 086598Wellcome Trust 093026Wellcome Trust 100140
6 · The paper itself

Abstract

Many genetic neurological disorders exhibit variable expression within affected families, often exemplified by variations in disease age at onset. Epistatic effects (i.e. effects of modifier genes on the disease gene) may underlie this variation, but the mechanistic basis for such epistatic interactions is rarely understood. Here we report a novel epistatic interaction between SPAST and the contiguous gene DPY30, which modifies age at onset in hereditary spastic paraplegia, a genetic axonopathy. We found that patients with hereditary spastic paraplegia caused by genomic deletions of SPAST that extended into DPY30 had a significantly younger age at onset. We show that, like spastin, the protein encoded by SPAST, the DPY30 protein controls endosomal tubule fission, traffic of mannose 6-phosphate receptors from endosomes to the Golgi, and lysosomal ultrastructural morphology. We propose that additive effects on this pathway explain the reduced age at onset of hereditary spastic paraplegia in patients who are haploinsufficient for both genes.

Indexed as

AdultAge of OnsetCD8 AntigensDNA-Binding ProteinsEpistasis, GeneticFemaleGuanine Nucleotide Exchange FactorsHeLa CellsHumansLysosomal-Associated Membrane Protein 1LysosomesMaleMembrane ProteinsMiddle AgedMutationNuclear ProteinsARFGEF1 protein, humanASH2L protein, humanCD8 AntigensDNA-Binding ProteinsDPY30 protein, humanGOLPH3 protein, humanGuanine Nucleotide Exchange FactorsLysosomal-Associated Membrane Protein 1Membrane ProteinsNuclear ProteinsRBBP5 protein, humanSpastinSPAST protein, humanTranscription Factors

Identifiers

PMID29481671
PMCPMC5917785
OpenAlexW2782741692

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.