Evidence map›Paper›PMID 29476350›Full record

ArticleClinical rheumatology2018

Genetic polymorphism of rs9277535 in HLA-DP associated with rheumatoid arthritis and anti-CCP production in a Chinese population.

Zhuochun Huang, Qian Niu, Bin Yang, Junlong Zhang, Min Yang, Huan Xu, Bei Cai, Jing Hu, Yongkang Wu, Lanlan Wang

Abstract read
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Article in Clinical rheumatology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Zhuochun HuangDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Qian NiuDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Bin YangDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Junlong ZhangDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Min YangDepartment of rheumatology and immunology, West China Hospital, Sichuan University, Sichuan Province, Chengdu, 610041, China.
Huan XuDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Bei CaiDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Jing HuDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Yongkang WuDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China.
Lanlan WangDepartment of lab medicine, West China Hospital, Sichuan University, Sichuan Province, Chengdu, China. wanglanlanhx@163.com.ORCID http://orcid.org/0000-0002-0601-1275
Sichuan University · CN

Funding

National Natural Science Foundation of China 81202354National Natural Science Foundation of China 81301496National Natural Science Foundation of China 81501816National Natural Science Foundation of China 81601830
6 · The paper itself

Abstract

HLA-II molecules are critical in triggering human immune response, especially in activating CD4+ T cells. HLA-DP, belonging to HLA-II molecules, draws increasing attention for its role in presentation of viral antigen and autoantigen to T cells. Researches reported single nucleotide polymorphism (SNP) of HLA-DP associated with HBV infection and autoimmune diseases such as SLE. However, little is known about the relationship between HLA-DP and rheumatoid arthritis (RA). Rs9277535 is located in 3' UTR region of HLA-DPB1, a subunit of HLA-DP, and was reported to affect HLA-DP mRNA expression. In the present study, we explored the relationship between gene polymorphism of rs9277535 in HLA-DPB1 and RA susceptibility and progression. Samples from 254 patients with RA and 391 age- and sex-matched healthy controls were collected and genotyped by a polymerase chain reaction-high-resolution melting (PCR-HRM) assay. Serological tests (anti-CCP, rheumatoid factor, C-reactive protein, anti-keratin antibody) were detected by laboratory assays. Strong association was observed between SNP rs9277535 in HLA-DP and RA susceptibility (allele frequency distribution: OR = 1.409, 95%CI = 1.121-1.773, P = 0.004). Further validation was provided by disease model analysis (recessive model: OR = 1.889, 95%CI = 1.194-2.990, P = 0.008; dominant model: OR = 1.464, 95%CI = 1.050-2.041, P = 0.025; additive model: OR = 2.208, 95%CI = 1.335-3.652, P = 0.003). Allele A was correlated to increased risk of RA. Serological test results demonstrated patients carrying allele A of rs9277535 had elevated serum anti-CCP antibody level. The present study provided evidence that HLA-DP gene polymorphism associated with RA susceptibility. Allele A of rs9277535 in HLA-DP correlated to increased risk of RA and elevated serum anti-CCP level.

Indexed as

Polymorphism, GeneticAllelesAnti-Citrullinated Protein AntibodiesArthritis, RheumatoidCase-Control StudiesCD4-Positive T-LymphocytesChinaC-Reactive ProteinFemaleGenetic Predisposition to DiseaseGenotypeHLA-D AntigensHLA-DP alpha-ChainsHumansMaleMiddle AgedAnti-Citrullinated Protein AntibodiesC-Reactive ProteinHLA-D AntigensHLA-DPA1 antigenHLA-DP alpha-ChainsRheumatoid FactorAnti-CCPGene polymorphismHLA-DPRheumatoid arthritis

Identifiers

PMID29476350
OpenAlexW2790440355

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.