Evidence map›Paper›PMID 29476335›Full record

ArticleClinical oral investigations2018

Transmission patterns of Streptococcus mutans demonstrated by a combined rep-PCR and MLST approach.

Stephanie S Momeni, Jennifer Whiddon, Stephen A Moser, Noel K Childers

Abstract read
In one paragraph

Article in Clinical oral investigations, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. [Association of sepM gene mutation with mutacin Ⅳ production byNan fang yi ke da xue xue bao = Journal of Southern Medical University · 2021
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Stephanie S MomeniDepartment of Pediatric Dentistry, The University of Alabama at Birmingham, The School of Dentistry Building Room 304, 1720 2nd Avenue South, Birmingham, AL, 35294-0007, USA.
Jennifer WhiddonDepartment of Pathology, The University of Alabama at Birmingham, West Pavilion Room P230, 1720 2nd Avenue South, Birmingham, AL, 35294-0007, USA.
Stephen A MoserDepartment of Pathology, The University of Alabama at Birmingham, West Pavilion Room P230, 1720 2nd Avenue South, Birmingham, AL, 35294-0007, USA.
Noel K ChildersDepartment of Pediatric Dentistry, The University of Alabama at Birmingham, The School of Dentistry Building Room 304, 1720 2nd Avenue South, Birmingham, AL, 35294-0007, USA. nkc@uab.edu.

Funding

Epidemiology of Dental Caries and Immunity in ChildrenR01DE016684 · NIDCR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CHILDERS, NOEL K · 2006 to 2013
$6.8M
Dental Academic Research Training Program (DART)T90DE022736 · NIDCR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Amjad Javed · 2012 to 2026
$6.7M
National Institute of Dental and Craniofacial Research DE016684National Institute of Dental and Craniofacial Research DE022736NIDCR NIH HHS R01 DE016684NIDCR NIH HHS T90 DE022736
6 · The paper itself

Abstract

objectiveClinical typing methods of the oral pathogen Streptococcus mutans with molecular analysis can be very specific, but expensive. Repetitive extragenic palindromic PCR (rep-PCR) is a relatively inexpensive pre-screening alternative for isolate selection for additional analyses. This study evaluated the prediction accuracy of using rep-PCR to identify S. mutans multilocus sequence typing (MLST) sequence types (ST) among children and their family members. Potential S. mutans strain sources were evaluated for evidence of transmission. MATERIAL AND

methodsTen dendrograms (rep-PCR), with 20 isolates each of the 10 most common S. mutans genotypes, were generated from different subjects. Using a cut-off of 98% similarity, 7-11 isolates of each genotype were selected for MLST analysis to determine ST match/no-match.

resultsOverall, rep-PCR was 75% effective at determining MLST ST match/no-match and 90% effective when applied to related individuals. Most genotypes were further differentiated by MLST. MLST ST diversity was greatest for one genotype (genotype 12, G12) and evidence of transmission among children and their family members was identified by rep-PCR and MLST. Younger children (6 months to 4 years old) shared ST with their mothers but 50% of older children (5-9 years old) had ST not identified in their mother. Six ST were shared between different families and probable source members were identified.

conclusionThis study confirms that rep-PCR offers an affordable option to predict diverse isolates for downstream applications. CLINICAL RELEVANCE: Using a combined rep-PCR and MLST approach, it is possible to track probable transmission and strain sources for S. mutans genotypes.

Indexed as

Multilocus Sequence TypingAlabamaChildChild, PreschoolFemaleGenotypeHumansInfantLongitudinal StudiesMaleNuclear FamilyPolymerase Chain ReactionRural PopulationStreptococcal InfectionsStreptococcus mutansGenetic diversityGenotypingMultilocus sequence typingStreptococcus mutansTransmission

Identifiers

PMID29476335
PMCPMC6107438

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.