Evidence map›Paper›PMID 29476161›Full record

ArticleScientific reports2018

Directed evolution of SIRT6 for improved deacylation and glucose homeostasis maintenance.

Or Gertman, Dotan Omer, Adi Hendler, Daniel Stein, Lior Onn, Yana Khukhin, Miguel Portillo, Raz Zarivach, Haim Y Cohen, Debra Toiber and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Or GertmanDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Dotan OmerDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Adi HendlerDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Daniel SteinDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Lior OnnDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Yana KhukhinDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Miguel PortilloDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Raz ZarivachDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Haim Y CohenThe Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan, 5290002, Israel.ORCID 0000-0002-6613-8710
Debra ToiberDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel.
Amir AharoniDepartment of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, 84105, Israel. aaharoni@bgu.ac.il.
Ben-Gurion University of the Negev · ILBar-Ilan University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mammalian SIRT6 is a well-studied histone deacetylase that was recently shown to exhibit high protein deacylation activity enabling the removal of long chain fatty acyl groups from proteins. SIRT6 was shown to play key roles in cellular homeostasis by regulating a variety of cellular processes including DNA repair and glucose metabolism. However, the link between SIRT6 enzymatic activities and its cellular functions is not clear. Here, we utilized a directed enzyme evolution approach to generate SIRT6 mutants with improved deacylation activity. We found that while two mutants show increased deacylation activity at high substrate concentration and improved glucose metabolism they exhibit no improvement and even abolished deacetylation activity on H3K9Ac and H3K56Ac in cells. Our results demonstrate the separation of function between SIRT6 catalytic activities and suggest that SIRT6 deacylation activity in cells is important for glucose metabolism and can be mediated by still unknown acylated cellular proteins.

Indexed as

AcylationAnimalsBinding SitesBiocatalysisDirected Molecular EvolutionGene LibraryGlucoseHEK293 CellsHistonesHomeostasisHumansHydrolysisKineticsModels, MolecularPeptidesProtein BindingGlucoseHistonesPeptidesSIRT6 protein, humanSirtuinsTumor Necrosis Factor-alpha

Identifiers

PMID29476161
PMCPMC5824787
OpenAlexW2806712856

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.