Evidence map›Paper›PMID 29476143›Full record

ArticleThe ISME journal2018

Peatland Acidobacteria with a dissimilatory sulfur metabolism.

Bela Hausmann, Claus Pelikan, Craig W Herbold, Stephan Köstlbacher, Mads Albertsen, Stephanie A Eichorst, Tijana Glavina Del Rio, Martin Huemer, Per H Nielsen, Thomas Rattei and 7 more

Abstract read
In one paragraph

Article in The ISME journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  7. International journal of systematic and evolutionary microbiology · 2026
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  19. Characterization of DsrD and its interaction with the DsrAB dissimilatory sulfite reductase.Protein science : a publication of the Protein Society · 2024
    Article
  20. International journal of systematic and evolutionary microbiology · 2024
    Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Bela HausmannDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-0846-1202
Claus PelikanDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Craig W HerboldDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Stephan KöstlbacherDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Mads AlbertsenDepartment of Chemistry and Bioscience, Center for Microbial Communities, Aalborg University, Aalborg, Denmark.ORCID http://orcid.org/0000-0002-6151-190X
Stephanie A EichorstDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Tijana Glavina Del RioUS Department of Energy Joint Genome Institute, Walnut Creek, CA, USA.
Martin HuemerDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Per H NielsenDepartment of Chemistry and Bioscience, Center for Microbial Communities, Aalborg University, Aalborg, Denmark.ORCID http://orcid.org/0000-0002-6402-1877
Thomas RatteiDivision of Computational Systems Biology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0002-0592-7791
Ulrich StinglDepartment for Microbiology and Cell Science, Fort Lauderdale Research and Education Center, UF/IFAS, University of Florida, Davie, FL, USA.ORCID http://orcid.org/0000-0002-0684-2597
Susannah G TringeUS Department of Energy Joint Genome Institute, Walnut Creek, CA, USA.ORCID http://orcid.org/0000-0001-6479-8427
Daniela TrojanDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Cecilia WentrupDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Dagmar WoebkenDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.
Michael PesterDepartment of Biology, University of Konstanz, Konstanz, Germany. michael.pester@dsmz.de.
Alexander LoyDivision of Microbial Ecology, Department of Microbiology and Ecosystem Science, Research Network Chemistry meets Microbiology, University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0001-8923-5882

Funding

Austrian Science Fund FWF I 1628Austrian Science Fund FWF P 23117Austrian Science Fund FWF P 25111
6 · The paper itself

Abstract

Sulfur-cycling microorganisms impact organic matter decomposition in wetlands and consequently greenhouse gas emissions from these globally relevant environments. However, their identities and physiological properties are largely unknown. By applying a functional metagenomics approach to an acidic peatland, we recovered draft genomes of seven novel Acidobacteria species with the potential for dissimilatory sulfite (dsrAB, dsrC, dsrD, dsrN, dsrT, dsrMKJOP) or sulfate respiration (sat, aprBA, qmoABC plus dsr genes). Surprisingly, the genomes also encoded DsrL, which so far was only found in sulfur-oxidizing microorganisms. Metatranscriptome analysis demonstrated expression of acidobacterial sulfur-metabolism genes in native peat soil and their upregulation in diverse anoxic microcosms. This indicated an active sulfate respiration pathway, which, however, might also operate in reverse for dissimilatory sulfur oxidation or disproportionation as proposed for the sulfur-oxidizing Desulfurivibrio alkaliphilus. Acidobacteria that only harbored genes for sulfite reduction additionally encoded enzymes that liberate sulfite from organosulfonates, which suggested organic sulfur compounds as complementary energy sources. Further metabolic potentials included polysaccharide hydrolysis and sugar utilization, aerobic respiration, several fermentative capabilities, and hydrogen oxidation. Our findings extend both, the known physiological and genetic properties of Acidobacteria and the known taxonomic diversity of microorganisms with a DsrAB-based sulfur metabolism, and highlight new fundamental niches for facultative anaerobic Acidobacteria in wetlands based on exploitation of inorganic and organic sulfur molecules for energy conservation.

Indexed as

AcidobacteriaBacterial ProteinsOxidation-ReductionSoilSoil MicrobiologySulfatesSulfitesSulfurWetlandsBacterial ProteinsSoilSulfatesSulfitesSulfur

Identifiers

PMID29476143
PMCPMC6018796

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.