Evidence map›Paper›PMID 29475973›Full record

ArticleDevelopment (Cambridge, England)2018

Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling.

Joshua V Troll, M Kristina Hamilton, Melissa L Abel, Julia Ganz, Jennifer M Bates, W Zac Stephens, Ellie Melancon, Michiel van der Vaart, Annemarie H Meijer, Martin Distel and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Goblet cell hyperplasia is not epithelial-autonomous in the Cftr knockout intestine.American journal of physiology. Gastrointestinal and liver physiology · 2022
    Article
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Joshua V TrollInstitute of Molecular Biology, Department of Biology, 1229 University of Oregon, Eugene, OR 97403, USA.
M Kristina HamiltonInstitute of Neuroscience, Department of Biology, 1254 University of Oregon, Eugene, OR 97403, USA.ORCID 0000-0003-0293-7043
Melissa L AbelInstitute of Molecular Biology, Department of Biology, 1229 University of Oregon, Eugene, OR 97403, USA.
Julia GanzInstitute of Neuroscience, Department of Biology, 1254 University of Oregon, Eugene, OR 97403, USA.ORCID 0000-0002-9471-1828
Jennifer M BatesInstitute of Molecular Biology, Department of Biology, 1229 University of Oregon, Eugene, OR 97403, USA.
W Zac StephensInstitute of Molecular Biology, Department of Biology, 1229 University of Oregon, Eugene, OR 97403, USA.ORCID 0000-0002-8072-9023
Ellie MelanconInstitute of Neuroscience, Department of Biology, 1254 University of Oregon, Eugene, OR 97403, USA.ORCID 0000-0002-1050-8217
Michiel van der VaartInstitute of Biology, Leiden University, 2300 RA Leiden, The Netherlands.
Annemarie H MeijerInstitute of Biology, Leiden University, 2300 RA Leiden, The Netherlands.ORCID 0000-0002-1325-0725
Martin DistelChildren's Cancer Research Institute, 1090 Vienna, Austria.ORCID 0000-0001-5942-0817
Judith S EisenInstitute of Neuroscience, Department of Biology, 1254 University of Oregon, Eugene, OR 97403, USA kguillem@uoregon.edu eisen@uoneuro.uoregon.edu.ORCID 0000-0003-1229-1696
Karen GuilleminInstitute of Molecular Biology, Department of Biology, 1229 University of Oregon, Eugene, OR 97403, USA kguillem@uoregon.edu eisen@uoneuro.uoregon.edu.ORCID 0000-0001-6004-9955
University of Oregon · USLeiden University · NLCanadian Institute for Advanced Research · CASt Anna Children's Hospital · AT

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
Research Area IIIP50GM098911 · NIGMS · UNIVERSITY OF OREGON · PI PARTHASARATHY, RAGHUVEER · 2012 to 2016
$9.8M
Graduate Training in Genetics Administrative Supplement - Career Curriculum DevelopmentT32GM007413 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 1985 to 2022
$7.8M
Roles of the microbiota and Notch signaling in specifying cell fateF32DK089716 · NIDDK · UNIVERSITY OF OREGON · PI TROLL, JOSHUA V · 2010 to 2011
$56k
NICHD NIH HHS P01 HD022486NIDDK NIH HHS F32 DK089716NIGMS NIH HHS P50 GM098911NIGMS NIH HHS T32 GM007413
6 · The paper itself

Abstract

Resident microbes promote many aspects of host development, although the mechanisms by which microbiota influence host tissues remain unclear. We showed previously that the microbiota is required for allocation of appropriate numbers of secretory cells in the zebrafish intestinal epithelium. Because Notch signaling is crucial for secretory fate determination, we conducted epistasis experiments to establish whether the microbiota modulates host Notch signaling. We also investigated whether innate immune signaling transduces microbiota cues via the Myd88 adaptor protein. We provide the first evidence that microbiota-induced, Myd88-dependent signaling inhibits host Notch signaling in the intestinal epithelium, thereby promoting secretory cell fate determination. These results connect microbiota activity via innate immune signaling to the Notch pathway, which also plays crucial roles in intestinal homeostasis throughout life and when impaired can result in chronic inflammation and cancer.

Indexed as

MicrobiotaAnimalsIntestinal MucosaMyeloid Differentiation Factor 88Receptors, NotchSignal TransductionZebrafishMyeloid Differentiation Factor 88Receptors, NotchIntestinal cell determinationMicrobiotaMyd88NotchSecretory cellZebrafish

Identifiers

PMID29475973
PMCPMC5869004
OpenAlexW2792879701

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.