Evidence map›Paper›PMID 29475869›Full record

ArticleApplied and environmental microbiology2018

Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses.

Laura L Lee, Sara E Blumer-Schuette, Javier A Izquierdo, Jeffrey V Zurawski, Andrew J Loder, Jonathan M Conway, James G Elkins, Mircea Podar, Alicia Clum, Piet C Jones and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Review
  3. Whither the genusFrontiers in microbiology · 2023
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. The thermophilic biomass-degrading bacteriumThe Journal of biological chemistry · 2019
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Laura L LeeDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Sara E Blumer-SchuetteDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Javier A IzquierdoDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Jeffrey V ZurawskiDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Andrew J LoderDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Jonathan M ConwayDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
James G ElkinsBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Mircea PodarBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Alicia ClumDOE Joint Genome Institute, Walnut Creek, California, USA.
Piet C JonesBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Marek J PiatekBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Deborah A WeighillBredesen Center, University of Tennessee, Knoxville, Tennessee, USA.
Daniel A JacobsonBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Michael W W AdamsDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
Robert M KellyDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA rmkelly@ncsu.edu.
North Carolina State University · USOak Ridge National Laboratory · USJoint Genome Institute · USUniversity of Georgia · USUniversity of Tennessee at Knoxville · US

Funding

Molecular Biotechnology Training at North Carolina State UniversityT32GM008776 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI KELLY, ROBERT M · 2000 to 2019
$3.9M
NIGMS NIH HHS T32 GM008776
6 · The paper itself

Abstract

Metagenomic data from Obsidian Pool (Yellowstone National Park, USA) and 13 genome sequences were used to reassess genus-wide biodiversity for the extremely thermophilic

Indexed as

Genome, BacterialMetagenomeBacillotaCelluloseGenomicsLigninMetagenomicsCelluloseLigninlignocelluloseCaldicellulosiruptorextreme thermophilepangenome

Identifiers

PMID29475869
PMCPMC5930323
OpenAlexW2789634691

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.