ArticleMolecular biology and evolution2018
RADpainter and fineRADstructure: Population Inference from RADseq Data.
Article in Molecular biology and evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 167 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
167 citing papers in PubMed.
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- Unravelling the Secret of Phantom Phenotypes in Macrolichens: Insights From Cladonia bellidiflora Complex.Molecular ecology · 2026Article
- Leveraging Next-Generation Tools for Genetic Assessment and Demographic Monitoring in Threatened and Elusive Humboldt Martens.Evolutionary applications · 2026Article
- Refugia, but Not for Everyone: Genetic Structure Differentiates Shallow and Mesophotic Populations of the Brooder Sponge Ircinia variabilis.Molecular ecology · 2026Article
- A New Challenge to Species Delimitation: Remarkable Genomic and Ecological Diversity in the Butterfly Melitaea diamina.Molecular ecology · 2026Article
- Weak Structure and Environment-Associated Loci Across a Eutrophication Gradient in a Resilient Coral Species.Ecology and evolution · 2026Article
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- Assessing Genetic Divergence and Adaptive Potential of Aroeira (Plants (Basel, Switzerland) · 2026Article
- Population genomics identifies genetic structure and admixture in the endangered Beale's Eyed Turtle (Marine life science & technology · 2026Article
- 3RAD-Guided SNP Discovery for Species Identification and Conservation of the Medicinal Southern African Tree GenusEcology and evolution · 2026Article
- Decoding the genomic basis of adaptive capacity and vulnerability in the high-altitudePlant diversity · 2026Article
- Evidence of Genetic Continuity in the Shortfin Mako Shark (Ecology and evolution · 2026Article
- An Equatorial Hemispheric Barrier Shapes the Diversification of Migratory Belenois Butterflies.Molecular ecology · 2026Article
- High-Throughput Sequencing Supports Strong Geographical Patterns in theJournal of fungi (Basel, Switzerland) · 2026Article
- Uncovering genetic population structure in the Endangered northern rockhopper penguin (Eudyptes moseleyi) across islands in the Southern Atlantic and Indian oceans.BMC genomics · 2026Article
- Genomic Evidence of Low Contemporary Effective Population Size and Southern Genetic Reservoirs in an Island Endemic Epiphytic Orchid of Taiwan.Ecology and evolution · 2026Article
- Integrative analysis of plastome, single-copy nuclear genePlant diversity · 2026Article
- Family life is critical for migration and survival in a long-lived social bird.Behavioral ecology and sociobiology · 2026Article
107 more citing papers are in PubMed but not listed here.
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Authors and funding
4 authors.
Funding
Abstract
Powerful approaches to inferring recent or current population structure based on nearest neighbor haplotype "coancestry" have so far been inaccessible to users without high quality genome-wide haplotype data. With a boom in nonmodel organism genomics, there is a pressing need to bring these methods to communities without access to such data. Here, we present RADpainter, a new program designed to infer the coancestry matrix from restriction-site-associated DNA sequencing (RADseq) data. We combine this program together with a previously published MCMC clustering algorithm into fineRADstructure-a complete, easy to use, and fast population inference package for RADseq data (https://github.com/millanek/fineRADstructure; last accessed February 24, 2018). Finally, with two example data sets, we illustrate its use, benefits, and robustness to missing RAD alleles in double digest RAD sequencing.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.