Evidence map›Paper›PMID 29474580›Full record

ArticleMolecular biology and evolution2018

Recently Evolved Tumor Suppressor Transcript TP73-AS1 Functions as Sponge of Human-Specific miR-941.

Haiyang Hu, Jian-Mei Liu, Zhenyu Hu, Xi Jiang, Xiaode Yang, Jiangxia Li, Yao Zhang, Haijing Yu, Philipp Khaitovich

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology and evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
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  11. Article
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  14. Unveiling ncRNA regulatory axes in atherosclerosis progression.Clinical and translational medicine · 2020
    Review
  15. miRNA-based biomarkers, therapies, and resistance in Cancer.International journal of biological sciences · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Haiyang HuSchool of Life Science and Technology, China Pharmaceutical University, Nanjing, China.
Jian-Mei LiuState Key Laboratory of Natural Resource Conservation and Utilization in Yunnan and Center for Life Science, School of Life Sciences, Yunnan University, Kunming, China.
Zhenyu HuState Key Laboratory of Natural Resource Conservation and Utilization in Yunnan and Center for Life Science, School of Life Sciences, Yunnan University, Kunming, China.
Xi JiangCAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai, China.
Xiaode YangCAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai, China.
Jiangxia LiState Key Laboratory of Natural Resource Conservation and Utilization in Yunnan and Center for Life Science, School of Life Sciences, Yunnan University, Kunming, China.
Yao ZhangState Key Laboratory of Natural Resource Conservation and Utilization in Yunnan and Center for Life Science, School of Life Sciences, Yunnan University, Kunming, China.
Haijing YuState Key Laboratory of Natural Resource Conservation and Utilization in Yunnan and Center for Life Science, School of Life Sciences, Yunnan University, Kunming, China.
Philipp KhaitovichSkolkovo Institute of Science and Technology, Skolkovo, Russia.
Yunnan University · CNCenter for Excellence in Molecular Cell Science · CNMax Planck Institute for Evolutionary Anthropology · DEUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNA (miRNA) sponges are vital components of posttranscriptional gene regulation. Yet, only a limited number of miRNA sponges have been identified. Here, we show that the recently evolved noncoding tumor suppressor transcript, antisense RNA to TP73 gene (TP73-AS1), functions as a natural sponge of human-specific miRNA miR-941. We find unusually nine high-affinity miR-941 binding sites clustering within 1 kb region on TP73-AS1, which forms miR-941 sponge region. This sponge region displays increased sequence constraint only in humans, and its formation can be traced to the tandem expansion of a 71-nt-long sequence containing a single miR-941 binding site in old world monkeys. We further confirm TP73-AS1 functions as an efficient miR-941 sponge based on massive transcriptome data analyses, wound-healing assay, and Argonaute protein immunoprecipitation experiments conducted in cell lines. The expression of miR-941 and its sponge correlate inversely across multiple healthy and cancerous tissues, with miR-941 being highly expressed in tumors and preferentially repressing tumor suppressors. Thus, the TP73-AS1 and miR-941 duo represents an unusual case of the extremely rapid evolution of noncoding regulators controlling cell migration, proliferation, and tumorigenesis.

Indexed as

Evolution, MolecularGene Expression RegulationHumansMicroRNAsRNA, Long NoncodingTumor Protein p73long non-coding RNA KIAA0495, humanMicroRNAsMIRN941 microRNA, humanRNA, Long NoncodingTP73 protein, humanTumor Protein p73

Identifiers

PMID29474580
PMCPMC5913670
OpenAlexW2794098970

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.