Evidence map›Paper›PMID 29474480›Full record

ArticlePloS one2018

Role of Su(Hw) zinc finger 10 and interaction with CP190 and Mod(mdg4) proteins in recruiting the Su(Hw) complex to chromatin sites in Drosophila.

Larisa Melnikova, Margarita Kostyuchenko, Alexander Parshikov, Pavel Georgiev, Anton Golovnin

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Mechanisms of Enhancer-Promoter Interactions in Higher Eukaryotes.International journal of molecular sciences · 2021
    Review
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Larisa MelnikovaDepartment of Drosophila Molecular Genetics, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Margarita KostyuchenkoDepartment of Drosophila Molecular Genetics, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Alexander ParshikovDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Pavel GeorgievDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.
Anton GolovninDepartment of Drosophila Molecular Genetics, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0003-4898-7118

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Su(Hw) belongs to the class of proteins that organize chromosome architecture and boundaries/insulators between regulatory domains. This protein contains a cluster of 12 zinc finger domains most of which are responsible for binding to three different modules in the consensus site. Su(Hw) forms a complex with CP190 and Mod(mdg4)-67.2 proteins that binds to well-known Drosophila insulators. To understand how Su(Hw) performs its activities and binds to specific sites in chromatin, we have examined the previously described su(Hw)f mutation that disrupts the 10th zinc finger (ZF10) responsible for Su(Hw) binding to the upstream module. The results have shown that Su(Hw)f loses the ability to interact with CP190 in the absence of DNA. In contrast, complete deletion of ZF10 does not prevent the interaction between Su(Hw)Δ10 and CP190. Having studied insulator complex formation in different mutant backgrounds, we conclude that both association with CP190 and Mod(mdg4)-67.2 partners and proper organization of DNA binding site are essential for the efficient recruitment of the Su(Hw) complex to chromatin insulators.

Indexed as

Zinc FingersAnimalsBinding SitesChromatinDNADrosophila melanogasterDrosophila ProteinsMicrotubule-Associated ProteinsNuclear ProteinsProtein BindingRepressor ProteinsTranscription FactorsChromatinCP190 protein, DrosophilaDNADrosophila ProteinsMicrotubule-Associated Proteinsmod(mdg4) protein, DrosophilaNuclear ProteinsRepressor Proteinssu(Hw) protein, DrosophilaTranscription Factors

Identifiers

PMID29474480
PMCPMC5825117

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.