Evidence map›Paper›PMID 29473954›Full record

ArticleFEBS letters2018

Converting a broad matrix metalloproteinase family inhibitor into a specific inhibitor of MMP-9 and MMP-14.

Jason Shirian, Valeria Arkadash, Itay Cohen, Tamila Sapir, Evette S Radisky, Niv Papo, Julia M Shifman

Open access · bronzeAbstract read
In one paragraph

Article in FEBS letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 47 citations in OpenAlex.

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  12. Engineering Selective TIMPs Using a Counter-Selective Screening Strategy.Methods in molecular biology (Clifton, N.J.) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jason ShirianDepartment of Biological Chemistry, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Israel.
Valeria ArkadashDepartment of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Itay CohenDepartment of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Tamila SapirDepartment of Biological Chemistry, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Israel.
Evette S RadiskyDepartment of Cancer Biology, Mayo Clinic Comprehensive Cancer Center, Jacksonville, FL, USA.
Niv PapoDepartment of Biotechnology Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Julia M ShifmanDepartment of Biological Chemistry, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Israel.
Ben-Gurion University of the Negev · ILHebrew University of Jerusalem · ILCancer Clinic · US

Funding

Inhibiting serine protease-induced prostate cancer progressionR01CA154387 · NCI · MAYO CLINIC JACKSONVILLE · PI RADISKY, EVETTE S · 2013 to 2017
$1.6M
Targeting MMP-9 for breast cancer therapy (R21 CA205471 Resubmission)R21CA205471 · NCI · MAYO CLINIC JACKSONVILLE · PI RADISKY, EVETTE S · 2016 to 2017
$375k
NCI NIH HHS R01 CA154387NCI NIH HHS R21 CA205471
6 · The paper itself

Abstract

MMP-14 and MMP-9 are two well-established cancer targets for which no specific clinically relevant inhibitor is available. Using a powerful combination of computational design and yeast surface display technology, we engineered such an inhibitor starting from a nonspecific MMP inhibitor, N-TIMP2. The engineered purified N-TIMP2 variants showed enhanced specificity toward MMP-14 and MMP-9 relative to a panel of off-target MMPs. MMP-specific N-TIMP2 sequence signatures were obtained that could be understood from the structural perspective of MMP/N-TIMP2 interactions. Our MMP-9 inhibitor exhibited 1000-fold preference for MMP-9 vs. MMP-14, which is likely to translate into significant differences under physiological conditions. Our results provide new insights regarding evolution of promiscuous proteins and optimization strategies for design of inhibitors with single-target specificities.

Indexed as

HumansMatrix Metalloproteinase 14Matrix Metalloproteinase 9Matrix Metalloproteinase InhibitorsProtein BindingTissue Inhibitor of Metalloproteinase-2Matrix Metalloproteinase 14Matrix Metalloproteinase 9Matrix Metalloproteinase InhibitorsMMP14 protein, humanMMP9 protein, humanTIMP2 protein, humanTissue Inhibitor of Metalloproteinase-2binding specificitymatrix metalloproteinase inhibitorsprotein engineeringprotein-protein interactions

Identifiers

PMID29473954
PMCPMC5903968
OpenAlexW2784269733

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.