Evidence map›Paper›PMID 29473932›Full record

ArticleGenetics and molecular biology

Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes).

Rafael Kretschmer, Thays Duarte de Oliveira, Ivanete de Oliveira Furo, Fabio Augusto Oliveira Silva, Ricardo José Gunski, Analía Del Valle Garnero, Marcelo de Bello Cioffi, Edivaldo Herculano Corrêa de Oliveira, Thales Renato Ochotorena de Freitas

Open access · goldAbstract read
In one paragraph

Article in Genetics and molecular biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  11. Comparative chromosome painting in Columbidae (Columbiformes) reinforces divergence in Passerea and Columbea.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Rafael KretschmerPrograma de Pós-Graduação em Genética e Biologia Molecular, PPGBM, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, RS, Brazil.
Thays Duarte de OliveiraPrograma de Pós-Graduação em Ciências Biológicas, PPGCB, Universidade Federal do Pampa, São Gabriel, Rio Grande do Sul, RS, Brazil.
Ivanete de Oliveira FuroPrograma de Pós-Graduação em Genética e Biologia Molecular, PPGBM, Universidade Federal do Pará, Belém, PA, Brazil.
Fabio Augusto Oliveira SilvaInstituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belém, PA, Brazil.
Ricardo José GunskiPrograma de Pós-Graduação em Ciências Biológicas, PPGCB, Universidade Federal do Pampa, São Gabriel, Rio Grande do Sul, RS, Brazil.
Analía Del Valle GarneroPrograma de Pós-Graduação em Ciências Biológicas, PPGCB, Universidade Federal do Pampa, São Gabriel, Rio Grande do Sul, RS, Brazil.
Marcelo de Bello CioffiDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.
Edivaldo Herculano Corrêa de OliveiraInstituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belém, PA, Brazil.
Thales Renato Ochotorena de FreitasPrograma de Pós-Graduação em Genética e Biologia Molecular, PPGBM, Universidade Federal do Rio Grande do Sul, Porto Alegre, Rio Grande do Sul, RS, Brazil.
Universidade Federal do Pampa · BRUniversidade Federal do Pará · BRUniversidade Federal do Rio Grande do Sul · BRInstituto Evandro Chagas · BRUniversidade Federal de São Carlos · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species.

Identifiers

PMID29473932
PMCPMC5901494
OpenAlexW2793093044

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.