Evidence map›Paper›PMID 29472622›Full record

ArticleScientific reports2018

Aberrant methylated key genes of methyl group metabolism within the molecular etiology of urothelial carcinogenesis.

Lars Erichsen, Foued Ghanjati, Agnes Beermann, Cedric Poyet, Thomas Hermanns, Wolfgang A Schulz, Hans-Helge Seifert, Peter J Wild, Lorenz Buser, Alexander Kröning and 7 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Consistent DNA Hypomethylations in Prostate Cancer.International journal of molecular sciences · 2022
    Article
  6. Article
  7. Article
  8. Methyl Group Metabolism in Differentiation, Aging, and Cancer.International journal of molecular sciences · 2022
    Review
  9. Epigenetics in the Diagnosis and Therapy of Malignant Melanoma.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Association of Polymorphisms in Genes Involved in One-Carbon Metabolism withInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 6 countries.

Lars ErichsenEpigenetics Core Laboratory, Institute of Transplantation Diagnostics and Cell Therapeutics, Medical Faculty, Heinrich-Heine University Duesseldorf, Moorenstr. 5, 40225, Duesseldorf, Germany.
Foued GhanjatiEpigenetics Core Laboratory, Institute of Transplantation Diagnostics and Cell Therapeutics, Medical Faculty, Heinrich-Heine University Duesseldorf, Moorenstr. 5, 40225, Duesseldorf, Germany.
Agnes BeermannEpigenetics Core Laboratory, Institute of Transplantation Diagnostics and Cell Therapeutics, Medical Faculty, Heinrich-Heine University Duesseldorf, Moorenstr. 5, 40225, Duesseldorf, Germany.
Cedric PoyetDepartment of Urology, University Hospital, University of Zurich, Zurich, Switzerland.
Thomas HermannsDepartment of Urology, University Hospital, University of Zurich, Zurich, Switzerland.
Wolfgang A SchulzDepartment of Urology, Medical Faculty, Heinrich-Heine University Duesseldorf, Duesseldorf, Germany.
Hans-Helge SeifertUrologische Klinik, Universitätsspital Basel, Basel, Switzerland.
Peter J WildInstitute of Surgical Pathology, University Hospital, University of Zurich, 8091, Zurich, Switzerland.
Lorenz BuserInstitute of Surgical Pathology, University Hospital, University of Zurich, 8091, Zurich, Switzerland.
Alexander KröningEpigenetics Core Laboratory, Institute of Transplantation Diagnostics and Cell Therapeutics, Medical Faculty, Heinrich-Heine University Duesseldorf, Moorenstr. 5, 40225, Duesseldorf, Germany.
Stefan BraunsteinDepartment of Pathology, Medical Faculty, Heinrich-Heine University Duesseldorf, Duesseldorf, Germany.
Martin AnlaufDepartment of Pathology, Medical Faculty, Heinrich-Heine University Duesseldorf, Duesseldorf, Germany.
Silvia JankowiakDepartment of Pathology, Medical Faculty, Heinrich-Heine University Duesseldorf, Duesseldorf, Germany.
Mohamed HassanDepartment of Surgery, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Marcelo L BendhackDepartment of Urology, University Hospital, Positivo University, Curitiba, Brazil.
Marcos J Araúzo-BravoGroup of Computational Biology and Systems Biomedicine, Biodonostia Health Research Institute, 20014, San Sebastián, Spain.ORCID 0000-0002-3264-464X
Simeon SantourlidisEpigenetics Core Laboratory, Institute of Transplantation Diagnostics and Cell Therapeutics, Medical Faculty, Heinrich-Heine University Duesseldorf, Moorenstr. 5, 40225, Duesseldorf, Germany. simeon.santourlidis@med.uni-duesseldorf.de.
Heinrich Heine University Düsseldorf · DEUniversity of Zurich · CHIkerbasque · ESTulane University · USUniversidade Positivo · BRUniversity Hospital of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Urothelial carcinoma (UC), the most common cancer of the urinary bladder causes severe morbidity and mortality, e.g. about 40.000 deaths in the EU annually, and incurs considerable costs for the health system due to the need for prolonged treatments and long-term monitoring. Extensive aberrant  DNA methylation is described to prevail in urothelial carcinoma and is thought to contribute to genetic instability, altered gene expression and tumor progression. However, it is unknown how this epigenetic alteration arises during carcinogenesis. Intact methyl group metabolism is required to ensure maintenance of cell-type specific methylomes and thereby genetic integrity and proper cellular function. Here, using two independent techniques for detecting DNA methylation, we observed DNA hypermethylation of the 5'-regulatory regions of the key methyl group metabolism genes ODC1, AHCY and MTHFR in early urothelial carcinoma. These hypermethylation events are associated with genome-wide DNA hypomethylation which is commonly associated with genetic instability. We therefore infer that hypermethylation of methyl group metabolism genes acts in a feed-forward cycle to promote additional DNA methylation changes and suggest a new hypothesis on the molecular etiology of urothelial carcinoma.

Indexed as

CarcinogenesisCarcinoma, Transitional CellDNA MethylationEpigenesis, GeneticFemaleHumansMaleNeoplasm ProteinsPromoter Regions, GeneticRisk FactorsUrologic NeoplasmsUrotheliumNeoplasm Proteins

Identifiers

PMID29472622
PMCPMC5823913
OpenAlexW2790358111

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.