Evidence map›Paper›PMID 29471464›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2018

Poor Immunogenicity, Not Vaccine Strain Egg Adaptation, May Explain the Low H3N2 Influenza Vaccine Effectiveness in 2012-2013.

Sarah Cobey, Sigrid Gouma, Kaela Parkhouse, Benjamin S Chambers, Hildegund C Ertl, Kenneth E Schmader, Rebecca A Halpin, Xudong Lin, Timothy B Stockwell, Suman R Das and 7 more

Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03734237 (A Pragmatic Assessment of Influenza Vaccine Effectiveness in the DoD), which is not on this map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03734237 phase4active not recruitingnot on this map

A Pragmatic Assessment of Influenza Vaccine Effectiveness in the DoD

TypeinterventionalSponsorHenry M. Jackson Foundation for the Advancement of Military MedicineRan2018 to 2026Enrolled15,448ConditionsInfluenza, Influenza-like Illness, Influenza VaccinesArmsEgg based influenza vaccines, Recombinant influenza vaccines, Cell-culture based influenza vaccines
3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 65 citations in OpenAlex.

  1. Randomised immunogenicity trial comparing 2019-2020 recombinant and egg-based influenza vaccines among frequently vaccinated healthcare personnel in Israel.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2024
    Trial
  2. Innate-like Gene Expression of Lung-Resident Memory CD8American journal of respiratory and critical care medicine · 2021
    Trial
  3. Trial
  4. Comparative Immunogenicity of Several Enhanced Influenza Vaccine Options for Older Adults: A Randomized, Controlled Trial.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2020
    Trial
  5. Article
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  8. Review
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  10. Review
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  12. Article
  13. A speed limit on serial strain replacement from original antigenic sin.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. A speed limit on serial strain replacement from original antigenic sin.bioRxiv : the preprint server for biology · 2024
    Article
  15. Effectiveness of Influenza Vaccines in the HIVE Household Cohort Over 8 Years: Is There Evidence of Indirect Protection?Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  16. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Sarah CobeyDepartment of Ecology & Evolution, University of Chicago, Illinois.
Sigrid GoumaDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia.
Kaela ParkhouseDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia.
Benjamin S ChambersDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia.
Hildegund C ErtlDivision of Geriatrics, Duke University Medical Center, North Carolina.
Kenneth E SchmaderDivision of Geriatrics, Duke University Medical Center, North Carolina.
Rebecca A HalpinDepartment of Infectious Disease, J. Craig Venter Institute, Rockville, Maryland.
Xudong LinDepartment of Infectious Disease, J. Craig Venter Institute, Rockville, Maryland.
Timothy B StockwellDepartment of Infectious Disease, J. Craig Venter Institute, Rockville, Maryland.
Suman R DasDepartment of Infectious Disease, J. Craig Venter Institute, Rockville, Maryland.
Emily LandonDepartment of Medicine, University of Chicago, Illinois.
Vera TesicDepartment of Pathology, University of Chicago, Illinois.
Ilan YoungsterDivision of Pediatrics and the Center for Microbiome Research, Assaf Harofeh Medical Center, Tel Aviv University, Israel.
Benjamin A PinskyDepartment of Pathology, Stanford University School of Medicine, California.
David E WentworthDepartment of Infectious Disease, J. Craig Venter Institute, Rockville, Maryland.
Scott E HensleyDepartment of Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia.
Yonatan H GradDepartment of Immunology and Infectious Diseases, Harvard TH Chan School of Public Health, Boston, Massachusetts.
J. Craig Venter Institute · USUniversity of Pennsylvania · USUniversity of Chicago · USGeriatric Research Education and Clinical Center · USBoston Children's Hospital · USBrigham and Women's Hospital · USStanford University · US

Funding

Impact of prior influenza exposures on antibody repertoires to new viral strainsR01AI108686 · NIAID · WISTAR INSTITUTE · PI HENSLEY, SCOTT ERIC · 2014 to 2022
$3.7M
The effect of human pre-exposure history on antigenic drift of influenza virusesR01AI113047 · NIAID · WISTAR INSTITUTE · PI HENSLEY, SCOTT ERIC · 2014 to 2018
$2.5M
Modeling the Evolutionary Dynamics of Immunity to Influenza for Vaccine DevelopmeDP2AI117921 · NIAID · UNIVERSITY OF CHICAGO · PI COBEY, SARAH · 2014 to 2014
$2.1M
NIAID NIH HHS DP2 AI117921NIAID NIH HHS HHSN272200900007CNIAID NIH HHS HHSN272201400005CNIAID NIH HHS R01 AI108686NIAID NIH HHS R01 AI113047
6 · The paper itself

Abstract

Background: Influenza vaccination aims to prevent infection by influenza virus and reduce associated morbidity and mortality; however, vaccine effectiveness (VE) can be modest, especially for subtype A(H3N2). Low VE has been attributed to mismatches between the vaccine and circulating influenza strains and to the vaccine's elicitation of protective immunity in only a subset of the population. The low H3N2 VE in the 2012-2013 season was attributed to egg-adaptive mutations that created antigenic mismatch between the actual vaccine strain (IVR-165) and both the intended vaccine strain (A/Victoria/361/2011) and the predominant circulating strains (clades 3C.2 and 3C.3). Methods: We investigated the basis of low VE in 2012-2013 by determining whether vaccinated and unvaccinated individuals were infected by different viral strains and by assessing the serologic responses to IVR-165, A/Victoria/361/2011, and 3C.2 and 3C.3 strains in an adult cohort before and after vaccination. Results: We found no significant genetic differences between the strains that infected vaccinated and unvaccinated individuals. Vaccination increased titers to A/Victoria/361/2011 and 3C.2 and 3C.3 representative strains as much as to IVR-165. These results are consistent with the hypothesis that vaccination boosted cross-reactive immune responses instead of specific responses against unique vaccine epitopes. Only approximately one-third of the cohort achieved a ≥4-fold increase in titer. Conclusions: In contrast to analyses based on ferret studies, low H3N2 VE in 2012-2013 in adults does not appear to be due to egg adaptation of the vaccine strain. Instead, low VE might have been caused by low vaccine immunogenicity in a subset of the population.

Indexed as

Immunogenicity, VaccineAdaptation, PhysiologicalAdultAgedAged, 80 and overAnimalsAntigens, ViralCohort StudiesCross ReactionsEggsFerretsGenome, ViralHigh-Throughput Nucleotide SequencingHumansInfluenza A Virus, H3N2 SubtypeInfluenza, HumanAntigens, ViralInfluenza Vaccines

Identifiers

PMID29471464
PMCPMC6051447
OpenAlexW2793986034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.