Evidence map›Paper›PMID 29470513›Full record

ArticlePloS one2018

Offspring sex impacts DNA methylation and gene expression in placentae from women with diabetes during pregnancy.

Jacqueline Alexander, April M Teague, Jing Chen, Christopher E Aston, Yuet-Kin Leung, Steven Chernausek, Rebecca A Simmons, Sara E Pinney

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jacqueline AlexanderDivision of Endocrinology and Diabetes, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
April M TeagueDepartment of Pediatrics, CMRI Metabolic Research Program, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, United States of America.
Jing ChenDepartment of Environmental Health, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America.
Christopher E AstonDepartment of Pediatrics, CMRI Metabolic Research Program, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, United States of America.
Yuet-Kin LeungDepartment of Environmental Health, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America.
Steven ChernausekDepartment of Pediatrics, CMRI Metabolic Research Program, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, United States of America.
Rebecca A SimmonsDivision of Neonatology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
Sara E PinneyDivision of Endocrinology and Diabetes, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0001-7824-2999
Children's Hospital of Philadelphia · USUniversity of Oklahoma Health Sciences Center · USUniversity of Cincinnati Medical Center · US

Funding

Tracking and Evaluation CoreU54GM104938 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI TIMOTHY M VANWAGONER · 2013 to 2026
$68.2M
REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI PINNEY, SUSAN MENGEL · 1992 to 2022
$35.4M
Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI Trevor M Penning · 2006 to 2026
$35.3M
Prenatal Conditions and the Pathway to Obesity and Diabetes in ChildrenR01DK089034 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI CHERNAUSEK, STEVEN D · 2010 to 2014
$1.4M
Mechanisms by which Exendin-4 normalizes epigenetic modifications in IUGR liverK08DK090302 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI PINNEY, SARA E · 2012 to 2015
$581k
NIDDK NIH HHS K08 DK090302NIDDK NIH HHS R01 DK089034NIEHS NIH HHS P30 ES006096NIEHS NIH HHS P30 ES013508NIGMS NIH HHS U54 GM104938NIH HHS K08 DK0903-02 9NIH HHS RO1 DK089034-03
6 · The paper itself

Abstract

aims/hypothesisWe hypothesized that diabetes during pregnancy (DDP) alters genome-wide DNA methylation in placenta resulting in differentially methylated loci of metabolically relevant genes and downstream changes in RNA and protein expression.

methodsWe mapped genome-wide DNA methylation with the Infinium 450K Human Methylation Bead Chip in term fetal placentae from Native American and Hispanic women with DDP using a nested case-control design (n = 17 pairs). RNA expression and protein levels were assayed via RNA-Seq and Western Blot.

resultsGenome-wide DNA methylation analysis revealed 465 CpG sites with significant changes for male offspring, 247 for female offspring, and 277 for offspring of both sexes (p<0.001). Placentae from female offspring were 40% more likely to have significant gains in DNA methylation compared with placentae from male offspring exposed to DDP (p<0.001). Changes in DNA methylation corresponded to changes in RNA and protein levels for 6 genes: PIWIL3, CYBA, GSTM1, GSTM5, KCNE1 and NXN. Differential DNA methylation was detected at loci related to mitochondrial function, DNA repair, inflammation, oxidative stress. CONCLUSIONS/

interpretationThese findings begin to explain mechanisms responsible for the increased risk for obesity and type 2 diabetes in offspring of mothers with DDP.

Indexed as

DNA MethylationGene ExpressionAdultCase-Control StudiesCpG IslandsDiabetes Mellitus, Type 2FemaleHumansInfant, NewbornMaleObesityPlacentaPregnancyPregnancy in DiabeticsPrenatal Exposure Delayed EffectsRNA, MessengerRNA, Messenger

Identifiers

PMID29470513
PMCPMC5823368
OpenAlexW2790643307

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.