Evidence map›Paper›PMID 29467333›Full record

ArticleJCI insight2018

CHD7 represses the retinoic acid synthesis enzyme ALDH1A3 during inner ear development.

Hui Yao, Sophie F Hill, Jennifer M Skidmore, Ethan D Sperry, Donald L Swiderski, Gilson J Sanchez, Cynthia F Bartels, Yehoash Raphael, Peter C Scacheri, Shigeki Iwase and 1 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

  1. Retinoic acid in health and disease.Signal transduction and targeted therapy · 2026
    Review
  2. Article
  3. Thymus Ontogeny and Development.Advances in experimental medicine and biology · 2025
    Review
  4. Review
  5. Article
  6. CHD7 and SOX2 act in a common gene regulatory network during mammalian semicircular canal and cochlear development.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Epigenetics in neuronal regeneration.Seminars in cell & developmental biology · 2020
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Hui YaoDepartment of Pediatrics and Communicable Diseases.
Sophie F HillCollege of Literature, Science, and the Arts.
Jennifer M SkidmoreDepartment of Pediatrics and Communicable Diseases.
Ethan D SperryDepartment of Human Genetics.
Donald L SwiderskiDepartment of Otolaryngology, University of Michigan, Ann Arbor, Michigan, USA.
Gilson J SanchezDepartment of Pediatrics and Communicable Diseases.
Cynthia F BartelsDepartment of Genetics, Case Western Reserve University, Cleveland, Ohio, USA.
Yehoash RaphaelDepartment of Otolaryngology, University of Michigan, Ann Arbor, Michigan, USA.
Peter C ScacheriDepartment of Genetics, Case Western Reserve University, Cleveland, Ohio, USA.
Shigeki IwaseDepartment of Human Genetics.
Donna M MartinDepartment of Pediatrics and Communicable Diseases.
Center for Non-Communicable Diseases · PKCase Western Reserve University · USNational Student Clearinghouse Research Center · USUniversity of Michigan · US

Funding

MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
Scientific Synergy CoreP30DC005188 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DOLAN, DAVID FRANCIS · 2002 to 2016
$10.3M
Developmental Mechanisms of the Chromodomain Gene Chd7R01DC009410 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARTIN, DONNA M. · 2009 to 2018
$3.7M
Biology of Colorectal Cancer Risk EnhancersR01CA204279 · NCI · UNIVERSITY OF VIRGINIA · PI CASEY, GRAHAM, SCACHERI, PETER CHRISTOPHER · 2016 to 2020
$3.0M
Exploration of Connexin26 Genotypes, Phenotypes, and Gene ReplacementR01DC014456 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARTIN, DONNA M., RAPHAEL, YEHOASH · 2016 to 2020
$2.5M
Neutralizing epigenomes in neurodevelopment disordersR01NS089896 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI IWASE, SHIGEKI · 2015 to 2019
$2.1M
Role of enhancer elements in regulating prometastatic transcriptional programs in osteosarcomaR01CA193677 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI SCACHERI, PETER CHRISTOPHER · 2016 to 2020
$1.8M
NCI NIH HHS R01 CA193677NCI NIH HHS R01 CA204279NIDCD NIH HHS P30 DC005188NIDCD NIH HHS R01 DC009410NIDCD NIH HHS R01 DC014456NIGMS NIH HHS T32 GM007863NINDS NIH HHS R01 NS089896
6 · The paper itself

Abstract

CHD7, an ATP-dependent chromatin remodeler, is disrupted in CHARGE syndrome, an autosomal dominant disorder characterized by variably penetrant abnormalities in craniofacial, cardiac, and nervous system tissues. The inner ear is uniquely sensitive to CHD7 levels and is the most commonly affected organ in individuals with CHARGE. Interestingly, upregulation or downregulation of retinoic acid (RA) signaling during embryogenesis also leads to developmental defects similar to those in CHARGE syndrome, suggesting that CHD7 and RA may have common target genes or signaling pathways. Here, we tested three separate potential mechanisms for CHD7 and RA interaction: (a) direct binding of CHD7 with RA receptors, (b) regulation of CHD7 levels by RA, and (c) CHD7 binding and regulation of RA-related genes. We show that CHD7 directly regulates expression of Aldh1a3, the gene encoding the RA synthetic enzyme ALDH1A3 and that loss of Aldh1a3 partially rescues Chd7 mutant mouse inner ear defects. Together, these studies indicate that ALDH1A3 acts with CHD7 in a common genetic pathway to regulate inner ear development, providing insights into how CHD7 and RA regulate gene expression and morphogenesis in the developing embryo.

Indexed as

Gene Expression Regulation, DevelopmentalAldehyde OxidoreductasesAnimalsCell Line, TumorCHARGE SyndromeDisease Models, AnimalDNA-Binding ProteinsDNA HelicasesEar, InnerEmbryo, MammalianFemaleGene Expression ProfilingGene Knockdown TechniquesHEK293 CellsHumansMalealdehyde dehydrogenase (NAD(P)+)Aldehyde OxidoreductasesCHD7 protein, humanChd7 protein, mouseDNA-Binding ProteinsDNA Helicasesretinaldehyde dehydrogenase 3, mouseRetinal DehydrogenaseRNA, Small InterferingTretinoinDevelopmentEmbryonic developmentGenetic diseasesNeuroscience

Identifiers

PMID29467333
PMCPMC5916250
OpenAlexW2788486777

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.