Evidence map›Paper›PMID 29467288›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Molecular basis for diversification of yeast prion strain conformation.

Yumiko Ohhashi, Yoshiki Yamaguchi, Hiroshi Kurahashi, Yuji O Kamatari, Shinju Sugiyama, Boran Uluca, Timo Piechatzek, Yusuke Komi, Toshinobu Shida, Henrik Müller and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Exposed Hsp70-binding site impacts yeast Sup35 prion disaggregation and propagation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Review
  10. Article
  11. Anti-Prion Systems inViruses · 2022
    Review
  12. Structural Bases of Prion Variation in Yeast.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Review
  15. Review
  16. Biophysical properties of a tau seed.Scientific reports · 2021
    Article
  17. Review
  18. Review
  19. Review
  20. How Do Yeast Cells Contend with Prions?International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Yumiko OhhashiLaboratory for Protein Conformation Diseases, RIKEN Brain Science Institute, Wako, 351-0198 Saitama, Japan.
Yoshiki YamaguchiStructural Glycobiology Team, RIKEN-Max Planck Joint Research Center, Wako, 351-0198 Saitama, Japan.
Hiroshi KurahashiLaboratory for Protein Conformation Diseases, RIKEN Brain Science Institute, Wako, 351-0198 Saitama, Japan.
Yuji O KamatariLife Science Research Center, Gifu University, 501-1193 Gifu, Japan.ORCID 0000-0001-9573-5162
Shinju SugiyamaLaboratory for Protein Conformation Diseases, RIKEN Brain Science Institute, Wako, 351-0198 Saitama, Japan.
Boran UlucaInstitute of Physical Biology, University of Dusseldorf, 40225 Dusseldorf, Germany.
Timo PiechatzekInstitute of Physical Biology, University of Dusseldorf, 40225 Dusseldorf, Germany.
Yusuke KomiLaboratory for Protein Conformation Diseases, RIKEN Brain Science Institute, Wako, 351-0198 Saitama, Japan.
Toshinobu ShidaLaboratory for Protein Conformation Diseases, RIKEN Brain Science Institute, Wako, 351-0198 Saitama, Japan.
Henrik MüllerInstitute of Physical Biology, University of Dusseldorf, 40225 Dusseldorf, Germany.
Shinya HanashimaStructural Glycobiology Team, RIKEN-Max Planck Joint Research Center, Wako, 351-0198 Saitama, Japan.
Henrike HeiseInstitute of Physical Biology, University of Dusseldorf, 40225 Dusseldorf, Germany.
Kazuo KuwataUnited Graduate School of Drug Discovery and Medical Information Sciences, Gifu University, 501-1194 Gifu, Japan.
Motomasa TanakaLaboratory for Protein Conformation Diseases, RIKEN Brain Science Institute, Wako, 351-0198 Saitama, Japan; motomasa@brain.riken.jp.
Forschungszentrum Jülich · DETokyo Institute of Technology · JPGifu University · JPRIKEN · JPRIKEN Center for Brain Science · JPTokyo University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Self-propagating β-sheet-rich fibrillar protein aggregates, amyloid fibers, are often associated with cellular dysfunction and disease. Distinct amyloid conformations dictate different physiological consequences, such as cellular toxicity. However, the origin of the diversity of amyloid conformation remains unknown. Here, we suggest that altered conformational equilibrium in natively disordered monomeric proteins leads to the adaptation of alternate amyloid conformations that have different phenotypic effects. We performed a comprehensive high-resolution structural analysis of Sup35NM, an N-terminal fragment of the Sup35 yeast prion protein, and found that monomeric Sup35NM harbored latent local compact structures despite its overall disordered conformation. When the hidden local microstructures were relaxed by genetic mutations or solvent conditions, Sup35NM adopted a strikingly different amyloid conformation, which redirected chaperone-mediated fiber fragmentation and modulated prion strain phenotypes. Thus, dynamic conformational fluctuations in natively disordered monomeric proteins represent a posttranslational mechanism for diversification of aggregate structures and cellular phenotypes.

Indexed as

AmyloidPeptide Termination FactorsPrionsSaccharomyces cerevisiae ProteinsKineticsNuclear Magnetic Resonance, BiomolecularProtein ConformationProtein FoldingAmyloidPeptide Termination FactorsPrionsSaccharomyces cerevisiae ProteinsSUP35 protein, S cerevisiaeaggregateamyloidprotein dynamicsprotein misfoldingyeast prion

Identifiers

PMID29467288
PMCPMC5877990
OpenAlexW2789710396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.