Evidence map›Paper›PMID 29466957›Full record

ArticleBMC medical genetics2018

Altered DNA methylation in liver and adipose tissues derived from individuals with obesity and type 2 diabetes.

Francisco Barajas-Olmos, Federico Centeno-Cruz, Carlos Zerrweck, Iván Imaz-Rosshandler, Angélica Martínez-Hernández, Emilio J Cordova, Claudia Rangel-Escareño, Faustino Gálvez, Armando Castillo, Hernán Maydón and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it, 49 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  9. Biomedicines · 2025
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  19. Making sense of the ageing methylome.Nature reviews. Genetics · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Francisco Barajas-OlmosInmunogenomics and Metabolic Disease Laboratory, Instituto Nacional de Medicina Genómica, SS México City, Mexico.
Federico Centeno-CruzInmunogenomics and Metabolic Disease Laboratory, Instituto Nacional de Medicina Genómica, SS México City, Mexico.
Carlos ZerrweckClínica Integral de Cirugía para la Obesidad y Enfermedades Metabólicas, Hospital General Tláhuac, Secretaría de Salud de la CDMX, México City, Mexico.
Iván Imaz-RosshandlerComputational Genomics Consortium, Instituto Nacional de Medicina Genómica, SS México City, Mexico.
Angélica Martínez-HernándezInmunogenomics and Metabolic Disease Laboratory, Instituto Nacional de Medicina Genómica, SS México City, Mexico.
Emilio J CordovaInmunogenomics and Metabolic Disease Laboratory, Instituto Nacional de Medicina Genómica, SS México City, Mexico.
Claudia Rangel-EscareñoComputational Genomics Consortium, Instituto Nacional de Medicina Genómica, SS México City, Mexico.
Faustino GálvezHospital Ángeles Pedregal, México City, Mexico.
Armando CastilloHospital Ángeles Pedregal, México City, Mexico.
Hernán MaydónClínica Integral de Cirugía para la Obesidad y Enfermedades Metabólicas, Hospital General Tláhuac, Secretaría de Salud de la CDMX, México City, Mexico.
Francisco CamposClínica Integral de Cirugía para la Obesidad y Enfermedades Metabólicas, Hospital General Dr. Rubén Leñero, Secretaría de Salud de la CDMX, México City, Mexico.
Diana Gabriela Maldonado-PintadoClínica Integral de Cirugía para la Obesidad y Enfermedades Metabólicas, Hospital General Dr. Rubén Leñero, Secretaría de Salud de la CDMX, México City, Mexico.
Lorena OrozcoInmunogenomics and Metabolic Disease Laboratory, Instituto Nacional de Medicina Genómica, SS México City, Mexico. lorozco@inmegen.gob.mx.ORCID 0000-0002-5801-9180
National Institute of Genomic Medicine · MXSecretaria de Salud · MXHospital Angeles Pedregal · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundObesity is a well-recognized risk factor for insulin resistance and type 2 diabetes (T2D), although the precise mechanisms underlying the relationship remain unknown. In this study we identified alterations of DNA methylation influencing T2D pathogenesis, in subcutaneous and visceral adipose tissues, liver, and blood from individuals with obesity.

methodsThe study included individuals with obesity, with and without T2D. From these patients, we obtained samples of liver tissue (n = 16), visceral and subcutaneous adipose tissues (n = 30), and peripheral blood (n = 38). We analyzed DNA methylation using Illumina Infinium Human Methylation arrays, and gene expression profiles using HumanHT-12 Expression BeadChip Arrays.

resultsAnalysis of DNA methylation profiles revealed several loci with differential methylation between individuals with and without T2D, in all tissues. Aberrant DNA methylation was mainly found in the liver and visceral adipose tissue. Gene ontology analysis of genes with altered DNA methylation revealed enriched terms related to glucose metabolism, lipid metabolism, cell cycle regulation, and response to wounding. An inverse correlation between altered methylation and gene expression in the four tissues was found in a subset of genes, which were related to insulin resistance, adipogenesis, fat storage, and inflammation.

conclusionsOur present findings provide additional evidence that aberrant DNA methylation may be a relevant mechanism involved in T2D pathogenesis among individuals with obesity.

Indexed as

DNA MethylationAdipogenesisAdultBody Mass IndexCpG IslandsDiabetes Mellitus, Type 2Epigenesis, GeneticGene OntologyGenome-Wide Association StudyHumansInsulin ResistanceIntra-Abdominal FatLipid MetabolismLiverMiddle AgedObesityAdipose tissueand liver tissueDNA methylationGene expressionType 2 diabetes

Identifiers

PMID29466957
PMCPMC5822594
OpenAlexW2802212271

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.