Evidence map›Paper›PMID 29466398›Full record

ArticlePloS one2018

Complex genetic patterns in human arise from a simple range-expansion model over continental landmasses.

Ricardo Kanitz, Elsa G Guillot, Sylvain Antoniazza, Samuel Neuenschwander, Jérôme Goudet

Open access · goldAbstract readValidation Study
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ricardo KanitzDepartment of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.
Elsa G GuillotDepartment of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0003-2550-3432
Sylvain AntoniazzaSwiss Orthonological Institute, Seeroze 1, Sempachas, Switzerland.
Samuel NeuenschwanderDepartment of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.
Jérôme GoudetDepartment of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.
SIB Swiss Institute of Bioinformatics · CHSwiss Ornithological Institute · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although it is generally accepted that geography is a major factor shaping human genetic differentiation, it is still disputed how much of this differentiation is a result of a simple process of isolation-by-distance, and if there are factors generating distinct clusters of genetic similarity. We address this question using a geographically explicit simulation framework coupled with an Approximate Bayesian Computation approach. Based on six simple summary statistics only, we estimated the most probable demographic parameters that shaped modern human evolution under an isolation by distance scenario, and found these were the following: an initial population in East Africa spread and grew from 4000 individuals to 5.7 million in about 132 000 years. Subsequent simulations with these estimates followed by cluster analyses produced results nearly identical to those obtained in real data. Thus, a simple diffusion model from East Africa explains a large portion of the genetic diversity patterns observed in modern humans. We argue that a model of isolation by distance along the continental landmasses might be the relevant null model to use when investigating selective effects in humans and probably many other species.

Indexed as

GeographyModels, GeneticDemographyGenetics, PopulationHumans

Identifiers

PMID29466398
PMCPMC5821356
OpenAlexW2951699435

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.