Evidence map›Paper›PMID 29464997›Full record

ArticleJournal of enzyme inhibition and medicinal chemistry2018

The discovery of novel HDAC3 inhibitors via virtual screening and in vitro bioassay.

Jie Xia, Huabin Hu, Wenjie Xue, Xiang Simon Wang, Song Wu

Abstract read
In one paragraph

Article in Journal of enzyme inhibition and medicinal chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Medicinal chemistry advances in targeting class I histone deacetylases.Exploration of targeted anti-tumor therapy · 2023
    Review
  5. Article
  6. Article
  7. Hybrid inhibitors of DNA and HDACs remarkably enhance cytotoxicity in leukaemia cells.Journal of enzyme inhibition and medicinal chemistry · 2020
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jie Xiaa State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Department of New Drug Research and Development , Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College , Beijing , China.ORCID http://orcid.org/0000-0002-9567-3763
Huabin Hua State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Department of New Drug Research and Development , Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College , Beijing , China.
Wenjie Xuea State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Department of New Drug Research and Development , Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College , Beijing , China.
Xiang Simon Wangb Molecular Modeling and Drug Discovery Core Laboratory for District of Columbia Center for AIDS Research (DC CFAR), Department of Pharmaceutical Sciences, College of Pharmacy , Howard University , Washington, DC , USA.
Song Wua State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Department of New Drug Research and Development , Institute of Materia Medica, Chinese Academy of Medical Sciences and Peking Union Medical College , Beijing , China.

Funding

SWG 2: Cure Research Scientific Working GroupP30AI117970 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI MICHAEL Ilya BUKRINSKY · 2015 to 2026
$29.6M
The District of Columbia Developmental Center for AIDS Research (DC D-CFAR)P30AI087714 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI GREENBERG, ALAN EDWARD · 2010 to 2014
$8.4M
NIAID NIH HHS P30 AI087714NIAID NIH HHS P30 AI117970
6 · The paper itself

Abstract

Histone deacetylase 3 (HDAC3) is a potential target for the treatment of human diseases such as cancers, diabetes, chronic inflammation and neurodegenerative diseases. Previously, we proposed a virtual screening (VS) pipeline named "Hypo1_FRED_SAHA-3" for the discovery of HDAC3 inhibitors (HDAC3Is) and had thoroughly validated it by theoretical calculations. In this study, we attempted to explore its practical utility in a large-scale VS campaign. To this end, we used the VS pipeline to hierarchically screen the Specs chemical library. In order to facilitate compound cherry-picking, we then developed a knowledge-based pose filter (PF) by using our in-house quantitative structure activity relationship- (QSAR-) modelling approach and coupled it with FRED and Autodock Vina. Afterward, we purchased and tested 11 diverse compounds for their HDAC3 inhibitory activity in vitro. The bioassay has identified compound 2 (Specs ID: AN-979/41971160) as a HDAC3I (IC

Indexed as

Drug DiscoveryBiological AssayDose-Response Relationship, DrugHistone Deacetylase 3Histone Deacetylase InhibitorsHistone DeacetylasesHumansModels, MolecularMolecular StructureQuantitative Structure-Activity RelationshipHistone Deacetylase 3Histone Deacetylase InhibitorsHistone DeacetylasesHistone deacetylase 3in vitro bioassaynovel inhibitorspose filtervirtual screening

Identifiers

PMID29464997
PMCPMC5978667

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.