Evidence map›Paper›PMID 29463742›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Origins and genetic legacies of the Caribbean Taino.

Hannes Schroeder, Martin Sikora, Shyam Gopalakrishnan, Lara M Cassidy, Pierpaolo Maisano Delser, Marcela Sandoval Velasco, Joshua G Schraiber, Simon Rasmussen, Julian R Homburger, María C Ávila-Arcos and 17 more

Abstract readHistorical Article
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

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  13. Human genetic admixture through the lens of population genomics.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  14. Ancient and modern genomics of the Ohlone Indigenous population of California.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Hannes SchroederCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark; hschroeder@snm.ku.dk ewillerslev@snm.ku.dk.ORCID 0000-0002-6743-0270
Martin SikoraCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
Shyam GopalakrishnanCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
Lara M CassidySmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Pierpaolo Maisano DelserSmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Marcela Sandoval VelascoCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
Joshua G SchraiberDepartment of Biology, Temple University, Philadelphia, PA 19122-6078.ORCID 0000-0002-7912-2195
Simon RasmussenDTU Bioinformatics, Department of Bio and Health Informatics, Technical University of Denmark, Kemitorvet, 2800 Kongens Lyngby, Denmark.
Julian R HomburgerDepartment of Genetics, School of Medicine, Stanford University, Stanford, CA 94305.
María C Ávila-ArcosInternational Laboratory for Human Genome Research, National Autonomous University of Mexico, Juriquilla 76230, Santiago de Querétaro, Mexico.
Morten E AllentoftCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
J Víctor Moreno-MayarCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
Gabriel RenaudCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
Alberto Gómez-CarballaUnidade de Xenética, Departamento de Anatomía Patolóxica e Ciencias Forenses, Instituto de Ciencias Forenses, Facultade de Medicina, Universidade de Santiago de Compostela, 15872 Galicia, Spain.
Jason E LaffoonFaculty of Archaeology, Leiden University, 2333 CC Leiden, The Netherlands.
Rachel J A HopkinsOxford Radiocarbon Accelerator Unit, Research Laboratory for Archaeology and the History of Art, University of Oxford, OX1 3QY Oxford, United Kingdom.
Thomas F G HighamOxford Radiocarbon Accelerator Unit, Research Laboratory for Archaeology and the History of Art, University of Oxford, OX1 3QY Oxford, United Kingdom.
Robert S CarrArchaeological and Historical Conservancy Inc., Davie, FL 33341.
William C SchafferLiberal Arts Department, Phoenix College, Phoenix, AZ 85013.
Jane S DayResearch Atlantica Inc., Boca Raton, FL 33432.
Menno HooglandFaculty of Archaeology, Leiden University, 2333 CC Leiden, The Netherlands.
Antonio SalasUnidade de Xenética, Departamento de Anatomía Patolóxica e Ciencias Forenses, Instituto de Ciencias Forenses, Facultade de Medicina, Universidade de Santiago de Compostela, 15872 Galicia, Spain.
Carlos D BustamanteDepartment of Genetics, School of Medicine, Stanford University, Stanford, CA 94305.
Rasmus NielsenCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark.
Daniel G BradleySmurfit Institute of Genetics, Trinity College Dublin, Dublin 2, Ireland.
Corinne L HofmanFaculty of Archaeology, Leiden University, 2333 CC Leiden, The Netherlands.
Eske WillerslevCenter for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, 1350 Copenhagen, Denmark; hschroeder@snm.ku.dk ewillerslev@snm.ku.dk.

Funding

INSTITUTIONAL TRAINING GRANT IN GENOME SCIENCET32HG000044 · NHGRI · STANFORD UNIVERSITY · PI MICHAEL P. SNYDER · 1995 to 2026
$32.2M
Population genomic methodology for analysis of ancient DNA: assessing population relationships and the temporal dynamics of natural selectionR35GM124745 · NIGMS · TEMPLE UNIV OF THE COMMONWEALTH · PI SCHRAIBER, JOSHUA G · 2017 to 2018
$739k
NHGRI NIH HHS T32 HG000044NIGMS NIH HHS R35 GM124745
6 · The paper itself

Abstract

The Caribbean was one of the last parts of the Americas to be settled by humans, but how and when the islands were first occupied remains a matter of debate. Ancient DNA can help answering these questions, but the work has been hampered by poor DNA preservation. We report the genome sequence of a 1,000-year-old Lucayan Taino individual recovered from the site of Preacher's Cave in the Bahamas. We sequenced her genome to 12.4-fold coverage and show that she is genetically most closely related to present-day Arawakan speakers from northern South America, suggesting that the ancestors of the Lucayans originated there. Further, we find no evidence for recent inbreeding or isolation in the ancient genome, suggesting that the Lucayans had a relatively large effective population size. Finally, we show that the native American components in some present-day Caribbean genomes are closely related to the ancient Taino, demonstrating an element of continuity between precontact populations and present-day Latino populations in the Caribbean.

Indexed as

AdultAmerican Indian or Alaska NativeArchaeologyBahamasDNA, AncientDNA, MitochondrialFemaleGenetics, PopulationGenome, HumanGenomicsHispanic or LatinoHistory, AncientHuman MigrationHumansMalePaleontologyDNA, AncientDNA, Mitochondrialancestryancient DNAarchaeologymigrationpaleogenomics

Identifiers

PMID29463742
PMCPMC5877975

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.