Evidence map›Paper›PMID 29463315›Full record

ArticleBiology of sex differences2018

X chromosome dosage and presence of SRY shape sex-specific differences in DNA methylation at an autosomal region in human cells.

Bianca Ho, Keelin Greenlaw, Abeer Al Tuwaijri, Sanny Moussette, Francisco Martínez, Elisa Giorgio, Alfredo Brusco, Giovanni Battista Ferrero, Natália D Linhares, Eugênia R Valadares and 6 more

Open access · goldAbstract read
In one paragraph

Article in Biology of sex differences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Research progress in the pathogenesis of chronic urticaria.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2023
    Article
  4. Genetic variation in the Y chromosome and sex-biased DNA methylation in somatic cells in the mouse.Mammalian genome : official journal of the International Mammalian Genome Society · 2023
    Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Sex bias in autoimmunity.Current opinion in rheumatology · 2019
    Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 5 countries.

Bianca HoDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.
Keelin GreenlawLady Davis Research Institute, Montréal, Quebec, Canada.
Abeer Al TuwaijriDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.
Sanny MoussetteThe Research Institute of the McGill University Health Centre (MUHC), 1001 Decarie Blvd., Bloc E, Room EM03226, Montreal, Quebec, H4A 3J1, Canada.
Francisco MartínezUnidad de Genética, Hospital Universitario y Politécnico La Fe, 46026, Valencia, Spain.
Elisa GiorgioDepartment of Medical Sciences, University of Torino, 10126, Turin, Italy.
Alfredo BruscoDepartment of Medical Sciences, University of Torino, 10126, Turin, Italy.
Giovanni Battista FerreroDepartment of Public Health and Pediatrics, University of Torino, 10126, Turin, Italy.
Natália D LinharesSetor de Citogenética, Laboratório Central do Hospital das Clínicas da Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Eugênia R ValadaresDepartamento de Propedêutica Complementar, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Marta SvartmanDepartamento de Biologia Geral, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Vera M KalscheuerResearch Group Development and Disease, Max Planck Institute for Molecular Genetics, Berlin, Germany.
Germán Rodríguez CriadoUnidad de Genética Clínica, Hospital Virgen del Rocío, 41013, Sevilla, Spain.
Catherine LapriseDépartement des Sciences Fondamentales, Université du Québec à Chicoutimi, Chicoutimi, Centre intégré universitaire de santé et services sociaux du Saguenay, Lac-Saint-Jean, Saguenay, Quebec, Canada.
Celia M T GreenwoodDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.
Anna K NaumovaDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada. anna.naoumova@mcgill.ca.
McGill University · CAUniversity of Turin · ITUniversidade Federal de Minas Gerais · BRCentre de Santé et de Services Sociaux de Chicoutimi · CAHospital das Clínicas da Universidade Federal de Minas Gerais · BRHospital Universitari i Politècnic La Fe · ESHospital Universitario Virgen del Rocío · ESMax Planck Institute for Molecular Genetics · DEMcGill University Health Centre · CA

Funding

CIHR MOP-115117
6 · The paper itself

Abstract

backgroundSexual dimorphism in DNA methylation levels is a recurrent epigenetic feature in different human cell types and has been implicated in predisposition to disease, such as psychiatric and autoimmune disorders. To elucidate the genetic origins of sex-specific DNA methylation, we examined DNA methylation levels in fibroblast cell lines and blood cells from individuals with different combinations of sex chromosome complements and sex phenotypes focusing on a single autosomal region--the differentially methylated region (DMR) in the promoter of the zona pellucida binding protein 2 (ZPBP2) as a reporter.

resultsOur data show that the presence of the sex determining region Y (SRY) was associated with lower methylation levels, whereas higher X chromosome dosage in the absence of SRY led to an increase in DNA methylation levels at the ZPBP2 DMR. We mapped the X-linked modifier of DNA methylation to the long arm of chromosome X (Xq13-q21) and tested the impact of mutations in the ATRX and RLIM genes, located in this region, on methylation levels. Neither ATRX nor RLIM mutations influenced ZPBP2 methylation in female carriers.

conclusionsWe conclude that sex-specific methylation differences at the autosomal locus result from interaction between a Y-linked factor SRY and at least one X-linked factor that acts in a dose-dependent manner.

Indexed as

Chromosomes, Human, XChromosomes, Human, YDNA MethylationGenes, srySex CharacteristicsCell LineEgg ProteinsFemaleHumansMaleMembrane ProteinsEgg ProteinsMembrane ProteinsZPBP2 protein, humanDNA methylationSexX chromosomeY chromosome

Identifiers

PMID29463315
PMCPMC5819645
OpenAlexW2788984236

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.