Evidence map›Paper›PMID 29462971›Full record

ArticlePathogens (Basel, Switzerland)2018

Species C Rotaviruses in Children with Diarrhea in India, 2010-2013: A Potentially Neglected Cause of Acute Gastroenteritis.

Sudipta Bhat, Jobin Jose Kattoor, Yashpal Singh Malik, Shubhankar Sircar, Pallavi Deol, Vinita Rawat, Ritu Rakholia, Souvik Ghosh, Anastasia N Vlasova, Touil Nadia and 2 more

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 5 countries.

Sudipta BhatDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly 243122, India. sudiptabhat1991@gmail.com.
Jobin Jose KattoorDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly 243122, India. jobinjkattoor@gmail.com.ORCID 0000-0002-0391-0064
Yashpal Singh MalikDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly 243122, India. malikyps@gmail.com.
Shubhankar SircarDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly 243122, India. shubhankar.sircar@gmail.com.
Pallavi DeolDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly 243122, India. pallavi.deol@gmail.com.
Vinita RawatDepartment of Microbiology, Government Medical College, Haldwani, Nainital, Uttarakhand 263 139, India. drvinitarawat@gmail.com.
Ritu RakholiaDepartment of Pediatrics, Government Medical College, Haldwani, Nainital, Uttarakhand 263 139, India. lalitriturakholia@rediffmail.com.
Souvik GhoshDepartment of Biomedical Sciences, One Health Center for Zoonoses and Tropical Veterinary Medicine, Ross University School of Veterinary Medicine, P.O. Box 334, Basseterre, St. Kitts, West Indies. souvikrota@gmail.com.
Anastasia N VlasovaFood Animal Health Research Program, CFAES, Ohio Agricultural Research and Development Center, Department of Veterinary Preventive Medicine, The Ohio State University, Wooster, OH 44691, USA. vlasova.1@osu.edu.
Touil NadiaLaboratoire de Biosécurité et de Recherche, Hôpital Militaire d'Instruction Med V de Rabat; 110 000 Morocco. ntouil2003@gmail.com.
Kuldeep DhamaDivision of Pathology, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly 243 122, India. kdhama@rediffmail.com.ORCID 0000-0001-7469-4752
Nobumichi KobayashiSapporo Medical University School of Medicine, Chuo-Ku, Sapporo 060-8556, Japan. koba103161@yahoo.co.jp.ORCID 0000-0002-0146-6211
Indian Veterinary Research Institute · INGovernment Medical College · INHôpital Militaire Moulay Ismail · MARoss University School of Veterinary Medicine · KNSapporo Medical University · JPThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

All over the world, children and adults are severely affected by acute gastroenteritis, caused by one of the emerging enteric pathogens, rotavirus C (RVC). At present, no extensive surveillance program is running for RVC in India, and its prevalence is largely unknown except cases of local outbreaks. Here, we intended to detect the presence of RVC in diarrheic children visiting or admitted to hospitals in Haldwani (state of Uttarakhand, India), a city located in the foothills of the Himalayas. During 2010-2013, we screened 119 samples for RVC by an RVC VP6 gene-specific RT-PCR. Of these, 38 (31.93%) were found positive, which is higher than the incidence rates reported so far from India. The phylogenetic analysis of the derived nucleotide sequences from one of the human RVC (HuRVC) isolates, designated as HuRVC/H28/2013/India, showed that the study isolate belongs to genotype I2, P2 and E2 for RVC structural genes 6 and 4 (VP6, and VP4) and non-structural gene 4 (NSP4), respectively. Furthermore, the VP6 gene of HuRVC/H28/2013/India shows the highest similarity to a recently-reported human-like porcine RVC (PoRVC/ASM140/2013/India, KT932963) from India suggesting zoonotic transmission. We also report a full-length NSP4 gene sequence of human RVC from India. Under the One-health platforms there is a need to launch combined human and animal RVC surveillance programs for a better understanding of the epidemiology of RVC infections and for implementing control strategies.

Indexed as

acute gastroenteritisIndiaNSP4 genesphylogenetic analysisrotavirus Csequence analysisVP4VP6

Identifiers

PMID29462971
PMCPMC5874749
OpenAlexW2789272173

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.