Evidence map›Paper›PMID 29462244›Full record

ArticleAnnals of botany2018

Scots pine aminopropyltransferases shed new light on evolution of the polyamine biosynthesis pathway in seed plants.

Jaana Vuosku, Katja Karppinen, Riina Muilu-Mäkelä, Tomonobu Kusano, G H M Sagor, Komlan Avia, Emmi Alakärppä, Johanna Kestilä, Marko Suokas, Kaloian Nickolov and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. International journal of molecular sciences · 2023
    Article
  6. Overexpression ofInternational journal of molecular sciences · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Salinity tolerance mechanisms and their breeding implications.Journal, genetic engineering & biotechnology · 2021
    Review
  14. Article
  15. Synergistic Effect ofPlants (Basel, Switzerland) · 2020
    Article
  16. Article
  17. Thermospermine Synthase (Frontiers in plant science · 2019
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 4 countries.

Jaana VuoskuUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Katja KarppinenUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Riina Muilu-MäkeläNatural Resources Institute Finland, Bio-based Business and Industry, Parkano, Finland.
Tomonobu KusanoTohoku University, Graduate School of Life Sciences, Sendai, Miyagi, Japan.
G H M SagorTohoku University, Graduate School of Life Sciences, Sendai, Miyagi, Japan.
Komlan AviaUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Emmi AlakärppäUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Johanna KestiläUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Marko SuokasUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Kaloian NickolovUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Leena HambergNatural Resources Institute Finland, Management and Production of Renewable Resources, Vantaa, Finland.
Outi SavolainenUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Hely HäggmanUniversity of Oulu, Department of Ecology and Genetics, Oulu, Finland.
Tytti SarjalaNatural Resources Institute Finland, Bio-based Business and Industry, Parkano, Finland.
University of Oulu · FINatural Resources Institute Finland · FITohoku University · JPCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Aims: Polyamines are small metabolites present in all living cells and play fundamental roles in numerous physiological events in plants. The aminopropyltransferases (APTs), spermidine synthase (SPDS), spermine synthase (SPMS) and thermospermine synthase (ACL5), are essential enzymes in the polyamine biosynthesis pathway. In angiosperms, SPMS has evolved from SPDS via gene duplication, whereas in gymnosperms APTs are mostly unexplored and no SPMS gene has been reported. The present study aimed to investigate the functional properties of the SPDS and ACL5 proteins of Scots pine (Pinus sylvestris L.) in order to elucidate the role and evolution of APTs in higher plants. Methods: Germinating Scots pine seeds and seedlings were analysed for polyamines by high-performance liquid chromatography (HPLC) and the expression of PsSPDS and PsACL5 genes by in situ hybridization. Recombinant proteins of PsSPDS and PsACL5 were produced and investigated for functional properties. Also gene structures, promoter regions and phylogenetic relationships of PsSPDS and PsACL5 genes were analysed. Key Results: Scots pine tissues were found to contain spermidine, spermine and thermospermine. PsSPDS enzyme catalysed synthesis of both spermidine and spermine. PsACL5 was found to produce thermospermine, and PsACL5 gene expression was localized in the developing procambium in embryos and tracheary elements in seedlings. Conclusions: Contrary to previous views, our results demonstrate that SPMS activity is not a novel feature developed solely in the angiosperm lineage of seed plants but also exists as a secondary property in the Scots pine SPDS enzyme. The discovery of bifunctional SPDS from an evolutionarily old conifer reveals the missing link in the evolution of the polyamine biosynthesis pathway. The finding emphasizes the importance of pre-existing secondary functions in the evolution of new enzyme activities via gene duplication. Our results also associate PsACL5 with the development of vascular structures in Scots pine.

Indexed as

Biological EvolutionGene Expression Regulation, PlantIn Situ HybridizationMetabolic Networks and PathwaysPinus sylvestrisPolyaminesPromoter Regions, GeneticSeedsSpermidine SynthaseSpermineSpermine SynthasePolyaminesSpermidine SynthaseSpermineSpermine Synthasethermospermine

Identifiers

PMID29462244
PMCPMC5946884
OpenAlexW2789995078

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.