Evidence map›Paper›PMID 29461832›Full record

ArticleThe journal of physical chemistry. B2018

Order, Disorder, and Temperature-Driven Compaction in a Designed Elastin Protein.

Kelly N Greenland, Ma Faye Charmagne A Carvajal, Jonathan M Preston, Siri Ekblad, William L Dean, Jeff Y Chiang, Ronald L Koder, Richard J Wittebort

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Elastin recoil is driven by the hydrophobic effect.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  5. Liquid to solid transition of elastin condensates.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kelly N GreenlandDepartment of Physics , The City College of New York , New York , New York 10031 , United States.
Ma Faye Charmagne A CarvajalDepartment of Chemistry , University of Louisville , Louisville , Kentucky 40292 , United States.
Jonathan M PrestonDepartment of Physics , The City College of New York , New York , New York 10031 , United States.
Siri EkbladDepartment of Physics , The City College of New York , New York , New York 10031 , United States.
William L DeanDepartment of Biochemistry and Molecular Genetics and the James Brown Cancer Center , University of Louisville School of Medicine , Louisville , Kentucky 40292 , United States.
Jeff Y ChiangDepartment of Physics , The City College of New York , New York , New York 10031 , United States.
Ronald L KoderDepartment of Physics , The City College of New York , New York , New York 10031 , United States.
Richard J WittebortDepartment of Chemistry , University of Louisville , Louisville , Kentucky 40292 , United States.ORCID 0000-0002-4358-0514

Funding

Cellular/Molecular Basis of Development: Research CenterG12MD007603 · NIMHD · CITY COLLEGE OF NEW YORK · PI PEZZANO, MARK · 2012 to 2017
$11.5M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR015495 · NCRR · NEW YORK STRUCTURAL BIOLOGY CENTER · PI RIFKIND, RICHARD A · 2000 to 2000
$2.0M
Structural and thermodynamic features which govern enzymatic nitric oxide detoxifR01GM111932 · NIGMS · CITY COLLEGE OF NEW YORK · PI KODER, RONALD · 2014 to 2017
$1.3M
NCRR NIH HHS C06 RR015495NIGMS NIH HHS R01 GM111932NIMHD NIH HHS G12 MD007603
6 · The paper itself

Abstract

Artificial minielastin constructs have been designed that replicate the structure and function of natural elastins in a simpler context, allowing the NMR observation of structure and dynamics of elastin-like proteins with complete residue-specific resolution. We find that the alanine-rich cross-linking domains of elastin have a partially helical structure, but only when capped by proline-rich hydrophobic domains. We also find that the hydrophobic domains, composed of prominent 6-residue repeats VPGVGG and APGVGV found in natural elastins, appear random coil by both NMR chemical shift analysis and circular dichroism. However, these elastin hydrophobic domains exhibit structural bias for a dynamically disordered conformation that is neither helical nor β sheet with a degree of nonrandom structural bias which is dependent on residue type and position in the sequence. Another nonrandom-coil aspect of hydrophobic domain structure lies in the fact that, in contrast to other intrinsically disordered proteins, these hydrophobic domains retain a relatively condensed conformation whether attached to cross-linking domains or not. Importantly, these domains and the proteins containing them constrict with increasing temperature by up to 30% in volume without becoming more ordered. This property is often observed in nonbiological polymers and suggests that temperature-driven constriction is a new type of protein structural change that is linked to elastin's biological functions of coacervation-driven assembly and elastic recoil.

Indexed as

TemperatureElastinHydrophobic and Hydrophilic InteractionsMolecular Dynamics SimulationElastin

Identifiers

PMID29461832
PMCPMC6588176

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.