Evidence map›Paper›PMID 29461641›Full record

ArticleThe New phytologist2018

Mutational studies of the Aux/IAA proteins in Physcomitrella reveal novel insights into their function.

Sibo Tao, Mark Estelle

Abstract read
In one paragraph

Article in The New phytologist, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Chemical Biology in Auxin Research.Cold Spring Harbor perspectives in biology · 2021
    Review
  15. Review
  16. Auxin Biology in Bryophyta: A Simple Platform with Versatile Functions.Cold Spring Harbor perspectives in biology · 2021
    Review
  17. Review
  18. Regulation of auxin transcriptional responses.Developmental dynamics : an official publication of the American Association of Anatomists · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Sibo TaoSection of Cell and Developmental Biology and Howard Hughes Medical Institute, University of California San Diego, La Jolla, CA 92093, USA.
Mark EstelleSection of Cell and Developmental Biology and Howard Hughes Medical Institute, University of California San Diego, La Jolla, CA 92093, USA.

Funding

MOLECULAR GENETICS OF AUXIN ACTION IN ARABIDOPSISR01GM043644 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI ESTELLE, MARK A · 1989 to 2021
$6.0M
NIGMS NIH HHS R01 GM043644
6 · The paper itself

Abstract

The plant hormone auxin regulates many aspects of plant growth and development. Auxin signaling involves hormone perception by the TRANSPORT INHIBITOR RESPONSE/AUXIN F-BOX (TIR1/AFB)-Aux/IAA co-receptor system, and the subsequent degradation of the Aux/IAA transcriptional repressors by the ubiquitin proteasome pathway. This leads to the activation of downstream gene expression and diverse physiological responses. Here, we investigate how the structural elements in the Aux/IAAs determine their function in Auxin perception and transcriptional repression. We took advantage of the facile genetics of the moss Physcomitrella patens to determine the activity of wild-type and mutant PpIAA1a proteins in a Δaux/iaa null background. In this way, Aux/IAA function was characterized at the molecular and physiological levels without the interference of genetic redundancy. We identified and characterized degron variants in Aux/IAAs that affect their stability and Auxin response. We also demonstrated that neither the Aux/IAA EAR motif nor Aux/IAA oligomerization is essential for the repressive function of Aux/IAA. Our study demonstrates how key elements within the Aux/IAA proteins fine tune stability and repressor activity, as well as the long-term developmental outcome.

Indexed as

Amino Acid MotifsAmino Acid SequenceBryopsidaDNA Mutational AnalysisGene Expression Regulation, PlantGenes, PlantIndoleacetic AcidsMutationOrgan SpecificityPlant ProteinsProtein DomainsTranscription, GeneticIndoleacetic AcidsPlant ProteinsAux/IAAauxinPhyscomitrellaplant developmentplant hormone

Identifiers

PMID29461641
PMCPMC6054139

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.