Evidence map›Paper›PMID 29461628›Full record

ArticleThe New phytologist2018

A cytochrome P450 CYP71 enzyme expressed in Sorghum bicolor root hair cells participates in the biosynthesis of the benzoquinone allelochemical sorgoleone.

Zhiqiang Pan, Scott R Baerson, Mei Wang, Joanna Bajsa-Hirschel, Agnes M Rimando, Xiaoqiang Wang, N P Dhammika Nanayakkara, Brice P Noonan, Michael E Fromm, Franck E Dayan and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
17.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 59 citations in OpenAlex.

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  6. BrCYP71 mutation resulted in stay-green in pak choi (Brassica rapa L. ssp. chinensis).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Zhiqiang PanUS Department of Agriculture, Agricultural Research Service, Natural Products Utilization Research Unit, University, MS 38677, USA.
Scott R BaersonUS Department of Agriculture, Agricultural Research Service, Natural Products Utilization Research Unit, University, MS 38677, USA.
Mei WangNational Center for Natural Products Research, School of Pharmacy, University of Mississippi, University, MS 38677, USA.
Joanna Bajsa-HirschelUS Department of Agriculture, Agricultural Research Service, Natural Products Utilization Research Unit, University, MS 38677, USA.
Agnes M RimandoUS Department of Agriculture, Agricultural Research Service, Natural Products Utilization Research Unit, University, MS 38677, USA.
Xiaoqiang WangDepartment of Biological Sciences, University of North Texas, Denton, TX 76203, USA.
N P Dhammika NanayakkaraNational Center for Natural Products Research, School of Pharmacy, University of Mississippi, University, MS 38677, USA.
Brice P NoonanDepartment of Biology, University of Mississippi, University, MS 38677, USA.
Michael E FrommEpicrop Technologies Inc., 5701 N. 58th Street, Suite 1, Lincoln, NE 68507, USA.
Franck E DayanUS Department of Agriculture, Agricultural Research Service, Natural Products Utilization Research Unit, University, MS 38677, USA.
Ikhlas A KhanNational Center for Natural Products Research, School of Pharmacy, University of Mississippi, University, MS 38677, USA.
Stephen O DukeUS Department of Agriculture, Agricultural Research Service, Natural Products Utilization Research Unit, University, MS 38677, USA.
Agricultural Research Service · USUniversity of Mississippi · USUnited States Department of Agriculture · USEpicrop Technologies (United States) · USUniversity of North Texas · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorgoleone, a major component of the hydrophobic root exudates of Sorghum spp., is probably responsible for many of the allelopathic properties attributed to members of this genus. Much of the biosynthetic pathway for this compound has been elucidated, with the exception of the enzyme responsible for the catalysis of the addition of two hydroxyl groups to the resorcinol ring. A library prepared from isolated Sorghum bicolor root hair cells was first mined for P450-like sequences, which were then analyzed by quantitative reverse transcription-polymerase chain reaction (RT-qPCR) to identify those preferentially expressed in root hairs. Full-length open reading frames for each candidate were generated, and then analyzed biochemically using both a yeast expression system and transient expression in Nicotiana benthamiana leaves. RNA interference (RNAi)-mediated repression in transgenic S. bicolor was used to confirm the roles of these candidates in the biosynthesis of sorgoleone in planta. A P450 enzyme, designated CYP71AM1, was found to be capable of catalyzing the formation of dihydrosorgoleone using 5-pentadecatrienyl resorcinol-3-methyl ether as substrate, as determined by gas chromatography-mass spectroscopy (GC-MS). RNAi-mediated repression of CYP71AM1 in S. bicolor resulted in decreased sorgoleone contents in multiple independent transformant events. Our results strongly suggest that CYP71AM1 participates in the biosynthetic pathway of the allelochemical sorgoleone.

Indexed as

Biosynthetic PathwaysAmino Acid SequenceBenzoquinonesCytochrome P-450 Enzyme SystemGene Expression Regulation, PlantLipidsMolecular Docking SimulationNicotianaPheromonesPhylogenyPlant ProteinsPlant RootsRNA InterferenceSaccharomyces cerevisiaeSorghumSubstrate SpecificityBenzoquinonesCytochrome P-450 Enzyme SystemLipidsPheromonesPlant ProteinssorgoleoneallelochemicalCYP71AM1cytochrome P450 monooxygenaseSorghum bicolorsorgoleone

Identifiers

PMID29461628
PMCPMC5887931
OpenAlexW2794114459

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.