Evidence map›Paper›PMID 29459707›Full record

ArticleNature ecology & evolution2018

Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat.

M Lisandra Zepeda Mendoza, Zijun Xiong, Marina Escalera-Zamudio, Anne Kathrine Runge, Julien Thézé, Daniel Streicker, Hannah K Frank, Elizabeth Loza-Rubio, Shengmao Liu, Oliver A Ryder and 19 more

Open access · hybridAbstract read
In one paragraph

Article in Nature ecology & evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
32.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 177 citations in OpenAlex.

  1. Review
  2. Article
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  6. Functional potential of gut microbiota inFrontiers in microbiology · 2026
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  7. Hologenomics Reveals Specialized Dietary Adaptations in the Mengla Snail-Eating Snake.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  8. Article
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  12. ISME communications · 2025
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  15. The hindgut microbiota of coconut rhinoceros beetles (Applied and environmental microbiology · 2024
    Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

29 authors at 14 institutions in 8 countries.

M Lisandra Zepeda MendozaCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark. lisandracady@gmail.com.ORCID http://orcid.org/0000-0002-1126-8219
Zijun XiongState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Marina Escalera-ZamudioDepartment of Wildlife Diseases, Leibniz Institute for Zoo and Wildlife Research (IZW), Berlin, Germany.ORCID http://orcid.org/0000-0002-4773-2773
Anne Kathrine RungeCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-2421-4831
Julien ThézéDepartment of Zoology, University of Oxford, Oxford, UK.
Daniel StreickerInstitute of Biodiversity, Animal Health and Comparative Medicine & MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, UK.ORCID http://orcid.org/0000-0001-7475-2705
Hannah K FrankDepartment of Biology, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-4507-181X
Elizabeth Loza-RubioCentro Nacional de Investigación Disciplinaria en Microbiología Animal-INIFAP, Ciudad de México, Mexico.
Shengmao LiuChina National GeneBank, BGI-Shenzhen, Shenzhen, China.
Oliver A RyderSan Diego Zoo Institute for Conservation Research, Escondido, CA, USA.ORCID http://orcid.org/0000-0003-2427-763X
Jose Alfredo Samaniego CastruitaCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.
Aris KatzourakisDepartment of Zoology, University of Oxford, Oxford, UK.
George PachecoCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.
Blanca TaboadaDepartamento de Genética del Desarrollo y Fisiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Mexico.ORCID http://orcid.org/0000-0003-1896-5962
Ulrike LöberDepartment of Wildlife Diseases, Leibniz Institute for Zoo and Wildlife Research (IZW), Berlin, Germany.
Oliver G PybusDepartment of Zoology, University of Oxford, Oxford, UK.
Yang LiChina National GeneBank, BGI-Shenzhen, Shenzhen, China.
Edith Rojas-AnayaCentro Nacional de Investigación Disciplinaria en Microbiología Animal-INIFAP, Ciudad de México, Mexico.
Kristine BohmannCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.
Aldo Carmona BaezCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.
Carlos F AriasDepartamento de Genética del Desarrollo y Fisiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Mexico.ORCID http://orcid.org/0000-0003-3130-4501
Shiping LiuChina National GeneBank, BGI-Shenzhen, Shenzhen, China.
Alex D GreenwoodDepartment of Wildlife Diseases, Leibniz Institute for Zoo and Wildlife Research (IZW), Berlin, Germany.
Mads F BertelsenCenter for Zoo and Wild Animal Health, Copenhagen Zoo, Frederiksberg, Denmark.
Nicole E WhiteAustralian Wildlife Forensic Services, Department of Environment and Agriculture, Curtin University, Perth, Australia.
Michael BunceAustralian Wildlife Forensic Services, Department of Environment and Agriculture, Curtin University, Perth, Australia.
Guojie ZhangState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Thomas Sicheritz-PonténCenter for Biological Sequence Analysis, Department of Bio and Health Informatics, Technical University of Denmark, Kongens Lyngby, Denmark. thomas@cbs.dtu.dk.ORCID http://orcid.org/0000-0001-6615-1141
M P Thomas GilbertCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark. tgilbert@snm.ku.dk.ORCID http://orcid.org/0000-0002-5805-7195
University of Copenhagen · DKChina National GeneBank · CNLeibniz Institute for Zoo and Wildlife Research · DEUniversity of Oxford · GBCurtin University · AUInstituto Nacional de Investigaciones Forestales Agrícolas y Pecuarias · MXUniversidad Nacional Autónoma de México · MXCopenhagen Zoo · DKKunming Institute of Zoology · CNMRC University of Glasgow Centre for Virus Research · GBNorwegian University of Science and Technology · NOSan Diego Zoo Institute for Conservation Research · USStanford University · USTechnical University of Denmark · DK

Funding

European Research Council 681396Medical Research Council MC_UU_12014/8Wellcome Trust
6 · The paper itself

Abstract

Adaptation to specialized diets often requires modifications at both genomic and microbiome levels. We applied a hologenomic approach to the common vampire bat (Desmodus rotundus), one of the only three obligate blood-feeding (sanguivorous) mammals, to study the evolution of its complex dietary adaptation. Specifically, we assembled its high-quality reference genome (scaffold N50 = 26.9 Mb, contig N50 = 36.6 kb) and gut metagenome, and compared them against those of insectivorous, frugivorous and carnivorous bats. Our analyses showed a particular common vampire bat genomic landscape regarding integrated viral elements, a dietary and phylogenetic influence on gut microbiome taxonomic and functional profiles, and that both genetic elements harbour key traits related to the nutritional (for example, vitamin and lipid shortage) and non-nutritional (for example, nitrogen waste and osmotic homeostasis) challenges of sanguivory. These findings highlight the value of a holistic study of both the host and its microbiota when attempting to decipher adaptations underlying radical dietary lifestyles.

Indexed as

Biological EvolutionDietGastrointestinal MicrobiomeGenomeAnimalsBloodChiropteraPhylogeny

Identifiers

PMID29459707
PMCPMC5868727
OpenAlexW2793592588

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.