Evidence map›Paper›PMID 29458667›Full record

ArticleJournal of medical microbiology2018

vacA s1m1 genotype and cagA EPIYA-ABC pattern are predominant among Helicobacter pylori strains isolated from Mexican patients with chronic gastritis.

Josefina Atrisco-Morales, Verónica I Martínez-Santos, Adolfo Román-Román, Judit Alarcón-Millán, José De Sampedro-Reyes, Iván Cruz-Del Carmen, Dinorah N Martínez-Carrillo, Gloria Fernández-Tilapa

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Effect of Probiotic-Assisted Eradication ofBioMed research international · 2022
    Trial
  2. Biomolecules · 2026
    Review
  3. Article
  4. Frontiers in pharmacology · 2024
    Article
  5. Article
  6. Frontiers in cellular and infection microbiology · 2023
    Review
  7. TheFrontiers in microbiology · 2023
    Article
  8. Diseases (Basel, Switzerland) · 2022
    Article
  9. Cells · 2020
    Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Josefina Atrisco-MoralesLaboratorio de Investigación Clínica, Facultad de Ciencias Químico-Biológicas, Universidad Autónoma de Guerrero, Av. Lázaro Cárdenas s/n C.U. Sur. Chilpancingo, Guerrero, C.P. 39090, Mexico.
Verónica I Martínez-SantosCONACYT Research Fellow- Universidad Autónoma de Guerrero, Facultad de Ciencias Químico-Biológicas, Universidad Autónoma de Guerrero, Guerrero, Mexico.
Adolfo Román-RománLaboratorio de Investigación en Bacteriología, Facultad de Ciencias Químico-Biológicas, Universidad Autónoma de Guerrero, Guerrero, Mexico.
Judit Alarcón-MillánLaboratorio de Investigación en Bacteriología, Facultad de Ciencias Químico-Biológicas, Universidad Autónoma de Guerrero, Guerrero, Mexico.
José De Sampedro-ReyesHospital General "Dr. Raymundo Abarca Alarcón", Chilpancingo, Guerrero, Mexico.
Iván Cruz-Del CarmenHospital General "Dr. Raymundo Abarca Alarcón", Chilpancingo, Guerrero, Mexico.
Dinorah N Martínez-CarrilloLaboratorio de Investigación Clínica, Facultad de Ciencias Químico-Biológicas, Universidad Autónoma de Guerrero, Av. Lázaro Cárdenas s/n C.U. Sur. Chilpancingo, Guerrero, C.P. 39090, Mexico.
Gloria Fernández-TilapaLaboratorio de Investigación Clínica, Facultad de Ciencias Químico-Biológicas, Universidad Autónoma de Guerrero, Av. Lázaro Cárdenas s/n C.U. Sur. Chilpancingo, Guerrero, C.P. 39090, Mexico.
Universidad Autónoma de Guerrero · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeVirulent genotypes of Helicobacter pylori vacA s1m1/cagA METHODOLOGY: A total of 164 patients with chronic gastritis were studied. Altogether, 50 H. pylori strains were isolated, and the status of cagA, babA2 and vacA genotypes was examined by PCR. cagA EPIYA segment identification was performed using PCR and sequencing of cagA fragments of six randomly selected strains.Results/Key findings. The overall prevalence of H. pylori was 30.5 %. Eighty percent of the isolated strains were vacA s1m1, and the cagA and babA2 genes were detected in 74 and 32 % of the strains, respectively. The most frequent genotypes were vacA s1m1/cagA

conclusionH. pylori strains carrying vacA s1m1, cagA

Indexed as

AdultAgedAllelesAntigens, BacterialBacterial ProteinsChronic DiseaseFemaleGastritisGastroscopyGenotypeHelicobacter InfectionsHelicobacter pyloriHumansMaleMexicoMiddle AgedAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pyloriVacA protein, Helicobacter pyloriBabACagAchronic gastritisEPIYA motifsH. pyloriVacA

Identifiers

PMID29458667
PMCPMC5882077
OpenAlexW2783136604

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.