Evidence map›Paper›PMID 29457983›Full record

ArticleAutophagy2018

Antimycobacterial effect of IFNG (interferon gamma)-induced autophagy depends on HMOX1 (heme oxygenase 1)-mediated increase in intracellular calcium levels and modulation of PPP3/calcineurin-TFEB (transcription factor EB) axis.

Nisha Singh, Pallavi Kansal, Zeeshan Ahmad, Navin Baid, Hariom Kushwaha, Neeraj Khatri, Ashwani Kumar

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Trial
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  4. Tacrolimus inhibits CVB3-targeted regulation of TFEB by PPP3/calcineurin.Frontiers in cellular and infection microbiology · 2026
    Article
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  6. TFEB safeguards trophoblast syncytialization in humans and mice.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Nisha Singha Council of Scientific and Industrial Research , Institute of Microbial Technology , Chandigarh , India.
Pallavi Kansala Council of Scientific and Industrial Research , Institute of Microbial Technology , Chandigarh , India.
Zeeshan Ahmada Council of Scientific and Industrial Research , Institute of Microbial Technology , Chandigarh , India.
Navin Baida Council of Scientific and Industrial Research , Institute of Microbial Technology , Chandigarh , India.
Hariom Kushwahaa Council of Scientific and Industrial Research , Institute of Microbial Technology , Chandigarh , India.
Neeraj Khatria Council of Scientific and Industrial Research , Institute of Microbial Technology , Chandigarh , India.
Ashwani Kumara Council of Scientific and Industrial Research , Institute of Microbial Technology , Chandigarh , India.ORCID 0000-0002-6240-6810
Institute of Microbial Technology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

IFNG (interferon gamma)-induced autophagy plays an important role in the elimination of intracellular pathogens, such as Mycobacterium tuberculosis (Mtb). However, the signaling cascade that leads to the increase in autophagy flux in response to IFNG is poorly defined. Here, we demonstrate that HMOX1 (heme oxygenase 1)-generated carbon monoxide (CO) is required for the induction of autophagy and killing of Mtb residing in macrophages in response to immunomodulation by IFNG. Interestingly, IFNG exposure of macrophages induces an increase in intracellular calcium levels that is dependent on HMOX1 generated CO. Chelation of intracellular calcium inhibits IFNG-mediated autophagy and mycobacterial clearance from macrophages. Moreover, we show that IFNG-mediated increase in intracellular calcium leads to activation of the phosphatase calcineurin (PPP3), which dephosphorylates the TFEB (transcription factor EB) to induce autophagy. PPP3-mediated activation and nuclear translocation of TFEB are critical in IFNG-mediated mycobacterial trafficking and survival inside the infected macrophages. These findings establish that IFNG utilizes the PPP3-TFEB signaling axis for inducing autophagy and regulating mycobacterial growth. We believe this signaling axis could act as a therapeutic target for suppression of growth of intracellular pathogens.

Indexed as

Signal TransductionAnimalsAnti-Bacterial AgentsAutophagyBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCalcineurinCalciumCalcium SignalingCarbon MonoxideCell NucleusHeme Oxygenase-1Interferon-gammaIntracellular SpaceLysosomesMacrophagesMiceAnti-Bacterial AgentsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCalcineurinCalciumCarbon MonoxideHeme Oxygenase-1Interferon-gammaTcfeb protein, mouseautophagycalcineurincalcium signalingcarbon monoxideheme oxygenase-1interferon-gammaTFEBtuberculosis pathogenesis

Identifiers

PMID29457983
PMCPMC6103408
OpenAlexW2789994821

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.