Evidence map›Paper›PMID 29457784›Full record

ArticleThe Journal of clinical investigation2018

HIV latency is reversed by ACSS2-driven histone crotonylation.

Guochun Jiang, Don Nguyen, Nancie M Archin, Steven A Yukl, Gema Méndez-Lagares, Yuyang Tang, Maher M Elsheikh, George R Thompson, Dennis J Hartigan-O'Connor, David M Margolis and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 164 citations in OpenAlex.

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  20. Histone crotonylation in tumors (Review).Molecular and clinical oncology · 2025
    Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Guochun JiangDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
Don NguyenDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
Nancie M ArchinDepartment of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Steven A YuklDepartment of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Gema Méndez-LagaresDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
Yuyang TangDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
Maher M ElsheikhDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
George R ThompsonDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
Dennis J Hartigan-O'ConnorDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
David M MargolisDepartment of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Joseph K WongDepartment of Medicine, UCSF, and San Francisco Veterans Affairs Medical Center, San Francisco, California, USA.
Satya DandekarDepartment of Medical Microbiology and Immunology, UCD, Davis, California, USA.
University of California Davis Medical Center · USUniversity of North Carolina at Chapel Hill · USSan Francisco VA Medical Center · US

Funding

National Institute on Aging (NIA) ColonyP51OD011107 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Simon J. Atkinson · 2012 to 2026
$191.5M
Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Virology, Immunology, and Microbiology CoreP30AI050410 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DAVID M. MARGOLIS · 2001 to 2026
$76.9M
Using NK Cells to eliminate the latent HIV reservoirU19AI096113 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WOELK, CHRISTOPHER H · 2011 to 2015
$39.5M
Collaboratory of AIDS Researchers for Eradication (CARE)UM1AI126619 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MARGOLIS, DAVID M. · 2016 to 2020
$23.2M
MOUNT SINAI MEDICAL SCIENTIST TRAINING PROGRAMT32GM007280 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BARON, MARGARET H · 1985 to 2021
$22.8M
INTESTINAL CYTOKINE &TCELL HOMEOSTASIS IN SIV INFECTIONR01AI043274 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI DANDEKAR, SATYA · 1998 to 2013
$5.1M
Reservoir depletion and anti-retroviral therapy for infant functional cureR01AI118451 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI HARTIGAN-O'CONNOR, DENNIS J. · 2015 to 2019
$4.2M
Early HIV Effects on Gut Immunity and Inflammation for Seeding Viral ReservoirsR01AI123105 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI DANDEKAR, SATYA · 2016 to 2020
$3.8M
Investigating Mechanisms of HIV Persistence in the GutR01DK108349 · NIDDK · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI YUKL, STEVEN A · 2015 to 2019
$2.2M
UC Davis MARC Scholar ProgramT34GM083894 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GOMES, ALDRIN V. · 2009 to 2019
$2.1M
Understanding HIV latency reversal and clearance of infected cells in vivoR01AI132128 · NIAID · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI WONG, JOSEPH K, YUKL, STEVEN A · 2017 to 2021
$1.9M
NIAID NIH HHS P30 AI027763NIAID NIH HHS P30 AI050410NIAID NIH HHS R01 AI043274NIAID NIH HHS R01 AI118451NIAID NIH HHS R01 AI123105NIAID NIH HHS R01 AI132128NIAID NIH HHS R21 AI116218NIAID NIH HHS R33 AI116218NIAID NIH HHS R56 AI116342NIAID NIH HHS U19 AI096113NIAID NIH HHS UM1 AI126619NIDDK NIH HHS R01 DK108349NIGMS NIH HHS T32 GM007280NIGMS NIH HHS T34 GM083894NIH HHS P51 OD011107
6 · The paper itself

Abstract

Eradication of HIV-1 (HIV) is hindered by stable viral reservoirs. Viral latency is epigenetically regulated. While the effects of histone acetylation and methylation at the HIV long-terminal repeat (LTR) have been described, our knowledge of the proviral epigenetic landscape is incomplete. We report that a previously unrecognized epigenetic modification of the HIV LTR, histone crotonylation, is a regulator of HIV latency. Reactivation of latent HIV was achieved following the induction of histone crotonylation through increased expression of the crotonyl-CoA-producing enzyme acyl-CoA synthetase short-chain family member 2 (ACSS2). This reprogrammed the local chromatin at the HIV LTR through increased histone acetylation and reduced histone methylation. Pharmacologic inhibition or siRNA knockdown of ACSS2 diminished histone crotonylation-induced HIV replication and reactivation. ACSS2 induction was highly synergistic in combination with either a protein kinase C agonist (PEP005) or a histone deacetylase inhibitor (vorinostat) in reactivating latent HIV. In the SIV-infected nonhuman primate model of AIDS, the expression of ACSS2 was significantly induced in intestinal mucosa in vivo, which correlated with altered fatty acid metabolism. Our study links the HIV/SIV infection-induced fatty acid enzyme ACSS2 to HIV latency and identifies histone lysine crotonylation as a novel epigenetic regulator for HIV transcription that can be targeted for HIV eradication.

Indexed as

Acetate-CoA LigaseAnimalsCD4-Positive T-LymphocytesChromatinEpigenesis, GeneticFatty AcidsHistonesHIV-1HIV InfectionsHumansJurkat CellsLeukocytes, MononuclearRNA, Small InterferingSignal TransductionSimian Immunodeficiency VirusTerminal Repeat SequencesAcetate-CoA LigaseACSS2 protein, humanChromatinFatty AcidsHistonesRNA, Small InterferingVorinostatAIDS/HIVInfectious diseaseTranscription

Identifiers

PMID29457784
PMCPMC5824862
OpenAlexW2788445510

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.