Evidence map›Paper›PMID 29451381›Full record

ArticleACS chemical neuroscience2018

From a Highly Disordered to a Metastable State: Uncovering Insights of α-Synuclein.

Yoann Cote, Patrice Delarue, Harold A Scheraga, Patrick Senet, Gia G Maisuradze

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Theoretical Methods for Assessing the Density of Protein Nanodroplets.International journal of molecular sciences · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Pathogenic Mechanisms of Cytosolic and Membrane-Enriched α-Synuclein Converge on Fatty Acid Homeostasis.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  6. Computer Simulations Aimed at Exploring Protein Aggregation and Dissociation.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  7. Characterization of Amyloidogenic Peptide Aggregability in Helical Subspace.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  8. Wild-TypeFrontiers in molecular biosciences · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Missense Mutations Modify the Conformational Ensemble of theFrontiers in molecular biosciences · 2021
    Article
  13. The metastable states of proteins.Protein science : a publication of the Protein Society · 2020
    Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yoann CoteDepartment of Integrative Structural Biology, Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS UMR 7104 - INSERM U 964, Université de Strasbourg, 1 rue Laurent Fries , 67400 Illkirch-Graffenstaden , France.
Patrice DelarueLaboratoire Interdisciplinaire Carnot de Bourgogne, UMR 6303 CNRS - Univ. Bourgogne Franche-Comté, 9 Av. Alain Savary, BP 47 870 , F-21078 Dijon Cedex, France.
Harold A ScheragaBaker Laboratory of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853-1301 , United States.ORCID 0000-0002-6314-5376
Patrick SenetLaboratoire Interdisciplinaire Carnot de Bourgogne, UMR 6303 CNRS - Univ. Bourgogne Franche-Comté, 9 Av. Alain Savary, BP 47 870 , F-21078 Dijon Cedex, France.ORCID 0000-0002-2339-0019
Gia G MaisuradzeBaker Laboratory of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853-1301 , United States.ORCID 0000-0002-1901-8433

Funding

INTERNAL BONDIN IN PROTEINSR01GM014312 · NIGMS · CORNELL UNIVERSITY ITHACA · PI MAISURADZE, GIA, RACKOVSKY, SHALOM R · 1985 to 2021
$9.4M
NIGMS NIH HHS R01 GM014312
6 · The paper itself

Abstract

α-Synuclein (αS) is a major constituent of Lewy bodies, the insoluble aggregates that are the hallmark of one of the most prevalent neurodegenerative disorders, Parkinson's disease (PD). The vast majority of experiments in vitro and in vivo provide extensive evidence that a disordered monomeric form is the predominant state of αS in water solution, and it undergoes a large-scale disorder-to-helix transition upon binding to vesicles of different types. Recently, another form, tetrameric, of αS with a stable helical structure was identified experimentally. It has been shown that a dynamic intracellular population of metastable αS tetramers and monomers coexists normally; and the tetramer plays an essential role in maintaining αS homeostasis. Therefore, it is of interest to know whether the tetramer can serve as a means of preventing or delaying the start of PD. Before answering this very important question, it is, first, necessary to find out, on an atomistic level, a correlation between tetramers and monomers; what mediates tetramer formation and what makes a tetramer stable. We address these questions here by investigating both monomeric and tetrameric forms of αS. In particular, by examining correlations between the motions of the side chains and the main chain, steric parameters along the amino-acid sequence, and one- and two-dimensional free-energy landscapes along the coarse-grained dihedral angles γ and δ and principal components, respectively, in monomeric and tetrameric αS, we were able to shed light on a fundamental relationship between monomers and tetramers, and the key residues involved in mediating formation of a tetramer. Also, the reasons for the stability of tetrameric αS and inability of monomeric αS to fold are elucidated here.

Indexed as

alpha-SynucleinAmino Acid SequenceEntropyHomeostasisHumansLewy BodiesParkinson Diseasealpha-Synucleinall-atom molecular dynamics simulationsdihedral principal component analysisfree-energy landscapeMonomeric alpha-synucleinParkinson’s diseasetetrameric alpha-synuclein

Identifiers

PMID29451381
PMCPMC5955826

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.