Evidence map›Paper›PMID 29450709›Full record

ArticleExtremophiles : life under extreme conditions2018

Biofilm formation and potential for iron cycling in serpentinization-influenced groundwater of the Zambales and Coast Range ophiolites.

D'Arcy R Meyer-Dombard, Caitlin P Casar, Alexander G Simon, Dawn Cardace, Matthew O Schrenk, Carlo A Arcilla

Abstract read
PubMed Publisher
In one paragraph

Article in Extremophiles : life under extreme conditions, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

D'Arcy R Meyer-DombardDepartment of Earth and Environmental Sciences, University of Illinois at Chicago, m/c 186, 845 W. Taylor St., Chicago, IL, 60515, USA. drmd@uic.edu.
Caitlin P CasarDepartment of Earth and Environmental Sciences, University of Illinois at Chicago, m/c 186, 845 W. Taylor St., Chicago, IL, 60515, USA.
Alexander G SimonDepartment of Earth and Environmental Sciences, University of Illinois at Chicago, m/c 186, 845 W. Taylor St., Chicago, IL, 60515, USA.
Dawn CardaceDepartment of Geosciences, University of Rhode Island, Kingston, IL, USA.
Matthew O SchrenkDepartment of Earth and Environmental Sciences, Michigan State University, East Lansing, MI, USA.
Carlo A ArcillaNational Institute of Geological Sciences, University of the Philippines, Diliman, Quezon City, Philippines.

Funding

Directorate for Geosciences 1147334
6 · The paper itself

Abstract

Terrestrial serpentinizing systems harbor microbial subsurface life. Passive or active microbially mediated iron transformations at alkaline conditions in deep biosphere serpentinizing ecosystems are understudied. We explore these processes in the Zambales (Philippines) and Coast Range (CA, USA) ophiolites, and associated surface ecosystems by probing the relevance of samples acquired at the surface to in situ, subsurface ecosystems, and the nature of microbe-mineral associations in the subsurface. In this pilot study, we use microcosm experiments and batch culturing directed at iron redox transformations to confirm thermodynamically based predictions that iron transformations may be important in subsurface serpentinizing ecosystems. Biofilms formed on rock cores from the Zambales ophiolite on surface and in-pit associations, confirming that organisms from serpentinizing systems can form biofilms in subsurface environments. Analysis by XPS and FTIR confirmed that enrichment culturing utilizing ferric iron growth substrates produced reduced, magnetic solids containing siderite, spinels, and FeO minerals. Microcosms and enrichment cultures supported organisms whose near relatives participate in iron redox transformations. Further, a potential 'principal' microbial community common to solid samples in serpentinizing systems was identified. These results indicate collectively that iron redox transformations should be more thoroughly and universally considered when assessing the function of terrestrial subsurface ecosystems driven by serpentinization.

Indexed as

BiofilmsMicrobiotaBiotransformationGeologic SedimentsGroundwaterIronOxidation-ReductionIronBiofilmsCROMODeep subsurface biosphereIron cyclingMicrobe–mineral interactionSerpentinizationZambales ophiolite

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.