Evidence map›Paper›PMID 29449575›Full record

ArticleNature communications2018

Actionable perturbations of damage responses by TCL1/ATM and epigenetic lesions form the basis of T-PLL.

A Schrader, G Crispatzu, S Oberbeck, P Mayer, S Pützer, J von Jan, E Vasyutina, K Warner, N Weit, N Pflug and 26 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 1 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 1 synthesis or guideline pooled it, 104 citations in OpenAlex.

  1. Advances and Perspectives in the Treatment of T-PLL.Current hematologic malignancy reports · 2020
    Pooled it
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  18. Genetic alterations in mature B- and T-cell lymphomas - a practical guide to WHO-HAEM5.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2024
    Article
  19. Review
  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 14 institutions in 6 countries.

A SchraderDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
G CrispatzuDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
S OberbeckDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
P MayerDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
S PützerDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
J von JanDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
E VasyutinaDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
K WarnerDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
N WeitDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
N PflugDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
T BraunDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
E I AnderssonHematology Research Unit Helsinki, Department of Medicine and Clinical Chemistry, University of Helsinki and Helsinki University Central Hospital (HUCH), Helsinki, 00260, Finland.ORCID http://orcid.org/0000-0002-3986-9892
B YadavHematology Research Unit Helsinki, Department of Medicine and Clinical Chemistry, University of Helsinki and Helsinki University Central Hospital (HUCH), Helsinki, 00260, Finland.
A RiabinskaDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
B MaurerInstitute of Animal Breeding and Genetics, University of Veterinary Medicine; Ludwig Boltzmann Institute for Cancer Research, Medical University of Vienna, Vienna, 1210, Austria.
M S Ventura FerreiraDepartment of Hematology, Oncology, and Stem Cell Transplantation, RWTH Aachen University Medical School, Aachen, 52074, Germany.
F BeierDepartment of Hematology, Oncology, and Stem Cell Transplantation, RWTH Aachen University Medical School, Aachen, 52074, Germany.
J AltmüllerCologne Center for Genomics, UoC, Germany, Institute of Human Genetics, University of Cologne (UoC), Köln, 50937, Germany.
M LanasaDuke University Medical Center, Durham, 27708, NC, USA.
C D HerlingDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
T HaferlachMLL Munich Leukemia Laboratory, Munich, 81377, Germany.
S StilgenbauerDepartment III of Internal Medicine, University Hospital Ulm, Ulm, 89081, Germany.
G HopfingerDepartment of Internal Medicine, Bone Marrow Transplantation Unit, Medical University of Vienna, Vienna, 1090, Austria.
M PeiferDepartment of Translational Genomics, UoC, Köln, 50937, Germany.ORCID http://orcid.org/0000-0002-5243-5503
T H BrümmendorfDepartment of Hematology, Oncology, and Stem Cell Transplantation, RWTH Aachen University Medical School, Aachen, 52074, Germany.
P NürnbergCologne Center for Genomics, UoC, Germany, Institute of Human Genetics, University of Cologne (UoC), Köln, 50937, Germany.
K S J Elenitoba-JohnsonDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Perelman School of Medicine, Philadelphia, 19104, PA, USA.
S ZhaInstitute for Cancer Genetics, Department of Pathology and Cell Biology, Herbert Irving Comprehensive Cancer Center, Division of Pediatric Oncology, Department of Pediatrics, Columbia University Medical Center, Columbia University, New York, 10032, USA.
M HallekDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
R MorigglInstitute of Animal Breeding and Genetics, University of Veterinary Medicine; Ludwig Boltzmann Institute for Cancer Research, Medical University of Vienna, Vienna, 1210, Austria.ORCID http://orcid.org/0000-0003-0918-9463
H C ReinhardtDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany.
M-H SternINSERM U830, Institut Curie, PSL Research University, Paris, 75013, France.ORCID http://orcid.org/0000-0002-8100-2272
S MustjokiHematology Research Unit Helsinki, Department of Medicine and Clinical Chemistry, University of Helsinki and Helsinki University Central Hospital (HUCH), Helsinki, 00260, Finland.
S NewrzelaSenckenberg Institute of Pathology, Goethe-University, Frankfurt/M., 60590, Germany.
P FrommoltBioinformatics Core Facility, CECAD, UoC, Köln, 50937, Germany.
M HerlingDepartment of Internal Medicine, Center for Integrated Oncology (CIO) Köln-Bonn, University of Cologne (UoC), Köln, 50937, Germany. marco.herling@uk-koeln.de.
University of Cologne · DERWTH Aachen University · DEUniversity of Helsinki · FIGoethe University Frankfurt · DEUniversity of Veterinary Medicine · HUCologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases · DEColumbia University Irving Medical Center · USDuke Medical Center · USInserm · FRMedical University of Vienna · ATMunich Leukemia Laboratory (Germany) · DETH Köln - University of Applied Sciences · DEUniversity Hospital Ulm · DEUniversity of Pennsylvania · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

T-cell prolymphocytic leukemia (T-PLL) is a rare and poor-prognostic mature T-cell malignancy. Here we integrated large-scale profiling data of alterations in gene expression, allelic copy number (CN), and nucleotide sequences in 111 well-characterized patients. Besides prominent signatures of T-cell activation and prevalent clonal variants, we also identify novel hot-spots for CN variability, fusion molecules, alternative transcripts, and progression-associated dynamics. The overall lesional spectrum of T-PLL is mainly annotated to axes of DNA damage responses, T-cell receptor/cytokine signaling, and histone modulation. We formulate a multi-dimensional model of T-PLL pathogenesis centered around a unique combination of TCL1 overexpression with damaging ATM aberrations as initiating core lesions. The effects imposed by TCL1 cooperate with compromised ATM toward a leukemogenic phenotype of impaired DNA damage processing. Dysfunctional ATM appears inefficient in alleviating elevated redox burdens and telomere attrition and in evoking a p53-dependent apoptotic response to genotoxic insults. As non-genotoxic strategies, synergistic combinations of p53 reactivators and deacetylase inhibitors reinstate such cell death execution.

Indexed as

DNA DamageEpigenesis, GeneticAdultAgedAnimalsAtaxia Telangiectasia Mutated ProteinsCell Line, TumorFemaleGene Expression ProfilingHEK293 CellsHumansKaplan-Meier EstimateLeukemia, Prolymphocytic, T-CellMaleMice, TransgenicMiddle AgedAtaxia Telangiectasia Mutated ProteinsATM protein, humanProto-Oncogene ProteinsTCL1A protein, human

Identifiers

PMID29449575
PMCPMC5814445
OpenAlexW2794971923

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.