Evidence map›Paper›PMID 29449565›Full record

ArticleNature communications2018

Amphibian chytridiomycosis outbreak dynamics are linked with host skin bacterial community structure.

Kieran A Bates, Frances C Clare, Simon O'Hanlon, Jaime Bosch, Lola Brookes, Kevin Hopkins, Emilia J McLaughlin, Olivia Daniel, Trenton W J Garner, Matthew C Fisher and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Article
  2. The fungal pathogenISME communications · 2026
    Article
  3. Article
  4. Article
  5. Effects of snake fungal disease (ophidiomycosis) on the skin microbiome across two major experimental scales.Conservation biology : the journal of the Society for Conservation Biology · 2025
    Article
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  16. Article
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  18. Article
  19. Article
  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kieran A BatesDepartment of Infectious Disease Epidemiology, Imperial College London, London, W2 1PG, UK. k.bates14@imperial.ac.uk.ORCID http://orcid.org/0000-0003-1559-6014
Frances C ClareInstitute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK.
Simon O'HanlonDepartment of Infectious Disease Epidemiology, Imperial College London, London, W2 1PG, UK.
Jaime BoschMuseo Nacional de Ciencias Naturales, CSIC, Jose Gutierrez Abascal 2, 28006, Madrid, Spain.
Lola BrookesInstitute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK.
Kevin HopkinsInstitute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK.
Emilia J McLaughlinInstitute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK.
Olivia DanielDepartment of Infectious Disease Epidemiology, Imperial College London, London, W2 1PG, UK.
Trenton W J GarnerInstitute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK.ORCID http://orcid.org/0000-0002-0336-9706
Matthew C FisherDepartment of Infectious Disease Epidemiology, Imperial College London, London, W2 1PG, UK.ORCID http://orcid.org/0000-0002-1862-6402
Xavier A HarrisonInstitute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK. xavier.harrison@ioz.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Host-associated microbes are vital for combatting infections and maintaining health. In amphibians, certain skin-associated bacteria inhibit the fungal pathogen Batrachochytrium dendrobatidis (Bd), yet our understanding of host microbial ecology and its role in disease outbreaks is limited. We sampled skin-associated bacteria and Bd from Pyrenean midwife toad populations exhibiting enzootic or epizootic disease dynamics. We demonstrate that bacterial communities differ between life stages with few shared taxa, indicative of restructuring at metamorphosis. We detected a significant effect of infection history on metamorph skin microbiota, with reduced bacterial diversity in epizootic populations and differences in community structure and predicted function. Genome sequencing of Bd isolates supports a single introduction to the Pyrenees and reveals no association between pathogen genetics and epidemiological trends. Our findings provide an ecologically relevant insight into the microbial ecology of amphibian skin and highlight the relative importance of host microbiota and pathogen genetics in predicting disease outcome.

Indexed as

AnimalsAntibiosisAnuraBacteriaBacterial Physiological PhenomenaChytridiomycotaMicrobiotaMycosesSkin

Identifiers

PMID29449565
PMCPMC5814395

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.