Evidence map›Paper›PMID 29449375›Full record

ArticleThe Journal of biological chemistry2018

Wayne S Kontur, Craig A Bingman, Charles N Olmsted, Douglas R Wassarman, Arne Ulbrich, Daniel L Gall, Robert W Smith, Larissa M Yusko, Brian G Fox, Daniel R Noguera and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. UsingACS ES&T engineering · 2026
    Article
  5. Article
  6. mSystems · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Transcriptomic data sets forMicrobiology resource announcements · 2025
    Article
  12. Obtaining PDC and other high-added value products from lignin byJournal of integrative bioinformatics · 2025
    Article
  13. Using DNA affinity purification sequencing (DAP-seq) to identifyMicrobiology resource announcements · 2025
    Article
  14. Laboratory evolution inApplied and environmental microbiology · 2025
    Article
  15. RB-TnSeq barcode abundance data sets forMicrobiology resource announcements · 2025
    Article
  16. Transcriptomic data sets forMicrobiology resource announcements · 2024
    Article
  17. Tools for genetic engineering and gene expression control inApplied and environmental microbiology · 2024
    Article
  18. Article
  19. EngineeringApplied and environmental microbiology · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Wayne S KonturFrom the Wisconsin Energy Institute.
Craig A Bingmanthe Department of Energy Great Lakes Bioenergy Research Center.
Charles N OlmstedFrom the Wisconsin Energy Institute.
Douglas R WassarmanFrom the Wisconsin Energy Institute.
Arne UlbrichChemistry.
Daniel L GallFrom the Wisconsin Energy Institute.
Robert W Smiththe Department of Energy Great Lakes Bioenergy Research Center.
Larissa M YuskoChemistry.
Brian G FoxFrom the Wisconsin Energy Institute.
Daniel R NogueraFrom the Wisconsin Energy Institute.
Joshua J CoonFrom the Wisconsin Energy Institute.
Timothy J DonohueFrom the Wisconsin Energy Institute, tdonohue@bact.wisc.edu.
University of Wisconsin–Madison · USGreat Lakes Bioenergy Research Center · USEnergy Center of Wisconsin · USMolecular Research Institute · US

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
High-Speed High-Sensitivity Detector for X-ray Micro-Crystallography at GM/CA@APSS10OD012289 · OD · UNIVERSITY OF CHICAGO · PI FISCHETTI, ROBERT F. · 2014 to 2014
$2.0M
NIGMS NIH HHS P41 GM103311NIH HHS S10 OD012289
6 · The paper itself

Abstract

As a major component of plant cell walls, lignin is a potential renewable source of valuable chemicals. Several sphingomonad bacteria have been identified that can break the β-aryl ether bond connecting most phenylpropanoid units of the lignin heteropolymer. Here, we tested three sphingomonads predicted to be capable of breaking the β-aryl ether bond of the dimeric aromatic compound guaiacylglycerol-β-guaiacyl ether (GGE) and found that

Indexed as

Amino Acid SubstitutionCatalytic DomainCrystallography, X-RayGene Expression Regulation, BacterialGenes, BacterialGlutathione TransferaseLigninModels, MolecularProtein ConformationProtein MultimerizationSphingomonadaceaeStereoisomerismSubstrate SpecificityTranscriptomeGlutathione TransferaseLigninbacterial metabolismbeta-aryl etherdeglutathionylationenzyme mechanismenzyme structureEscherichia coli (E. coli)glutathione S-transferaseslignin degradationNovosphingobium aromaticivoransNu-class

Identifiers

PMID29449375
PMCPMC5892560
OpenAlexW2786479777

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.