Evidence map›Paper›PMID 29448037›Full record

ArticleMethods (San Diego, Calif.)2018

Quantifying membrane protein oligomerization with fluorescence cross-correlation spectroscopy.

Megan J Kaliszewski, Xiaojun Shi, Yixuan Hou, Ryan Lingerak, Soyeon Kim, Paul Mallory, Adam W Smith

Open access · greenAbstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. HER4 is a high-affinity dimerization partner for all EGFR/HER/ErbB family proteins.Protein science : a publication of the Protein Society · 2024
    Article
  9. Review
  10. Article
  11. The β2-adrenergic receptor associates with CXCR4 multimers in human cancer cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Megan J KaliszewskiDepartment of Chemistry, University of Akron, Akron, OH 44325, USA.
Xiaojun ShiDepartment of Chemistry, University of Akron, Akron, OH 44325, USA.
Yixuan HouFood Animal Health Research Program, Ohio Agriculture Research and Development Center, Department of Veterinary Preventive Medicine, The Ohio State University, Wooster, OH 44691, USA.
Ryan LingerakDepartment of Biology, University of Akron, Akron, OH 44325, USA.
Soyeon KimDepartment of Chemistry, University of Akron, Akron, OH 44325, USA.
Paul MalloryDepartment of Chemistry, University of Akron, Akron, OH 44325, USA.
Adam W SmithDepartment of Chemistry, University of Akron, Akron, OH 44325, USA. Electronic address: asmith5@uakron.edu.
University of Akron · USThe Ohio State University · US

Funding

Transmembrane Peptides for Targeting Acidosis - Equipment SupplementR01GM120642 · NIGMS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI BARRERA, FRANCISCO NICOLAS · 2016 to 2020
$1.7M
Spatial Organization and Molecular Interactions of Visual OpsinsR15EY024451 · NEI · UNIVERSITY OF AKRON · PI SMITH, ADAM W. · 2015 to 2015
$441k
NEI NIH HHS R15 EY024451NIGMS NIH HHS R01 GM120642
6 · The paper itself

Abstract

Fluorescence cross-correlation spectroscopy (FCCS) is an advanced fluorescence technique that can quantify protein-protein interactions in vivo. Due to the dynamic, heterogeneous nature of the membrane, special considerations must be made to interpret FCCS data accurately. In this study, we describe a method to quantify the oligomerization of membrane proteins tagged with two commonly used fluorescent probes, mCherry (mCH) and enhanced green (eGFP) fluorescent proteins. A mathematical model is described that relates the relative cross-correlation value (f

Indexed as

Models, ChemicalProtein MultimerizationAnimalsChlorocebus aethiopsCOS CellsFluorescenceFluorescent DyesGreen Fluorescent ProteinsMembrane ProteinsModels, StatisticalProtein BindingSpectrometry, FluorescenceFluorescent DyesGreen Fluorescent ProteinsMembrane ProteinsDimerizationFluorescence correlation spectroscopyFluorescence cross-correlation spectroscopyFRETLive cell fluorescenceMembrane protein dimerization

Identifiers

PMID29448037
PMCPMC5999557
OpenAlexW2790032844

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.