Evidence map›Paper›PMID 29445900›Full record

ArticleFamilial cancer2018

Clinical interpretation of pathogenic ATM and CHEK2 variants on multigene panel tests: navigating moderate risk.

Allison H West, Kathleen R Blazer, Jessica Stoll, Matthew Jones, Caroline M Weipert, Sarah M Nielsen, Sonia S Kupfer, Jeffrey N Weitzel, Olufunmilayo I Olopade

Open access · greenAbstract read
In one paragraph

Article in Familial cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Guideline
  2. Trial
  3. Article
  4. HGG advances · 2023
    Article
  5. Article
  6. Role of POLE and POLD1 in familial cancer.Genetics in medicine : official journal of the American College of Medical Genetics · 2020
    Article
  7. Article
  8. Article
  9. Prevalence of Inherited Mutations in Breast Cancer Predisposition Genes among Women in Uganda and Cameroon.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2020
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Allison H WestSection of Hematology/Oncology, The University of Chicago Comprehensive Cancer Center, 5841 S. Maryland Avenue, MC2115, Chicago, IL, 60637-1470, USA.
Kathleen R BlazerDivision of Clinical Cancer Genomics, City of Hope Comprehensive Cancer Center and Beckman Research Institute, Duarte, CA, USA.
Jessica StollDepartment of Medicine, Center for Clinical Cancer Genetics, The University of Chicago, Chicago, IL, USA.
Matthew JonesPritzker School of Medicine, University of Chicago, Chicago, IL, USA.
Caroline M WeipertDepartment of Medicine, Center for Clinical Cancer Genetics, The University of Chicago, Chicago, IL, USA.
Sarah M NielsenDepartment of Medicine, Center for Clinical Cancer Genetics, The University of Chicago, Chicago, IL, USA.
Sonia S KupferDepartment of Medicine, Center for Clinical Cancer Genetics, The University of Chicago, Chicago, IL, USA.
Jeffrey N WeitzelDivision of Clinical Cancer Genomics, City of Hope Comprehensive Cancer Center and Beckman Research Institute, Duarte, CA, USA.
Olufunmilayo I OlopadeSection of Hematology/Oncology, The University of Chicago Comprehensive Cancer Center, 5841 S. Maryland Avenue, MC2115, Chicago, IL, 60637-1470, USA. folopade@medicine.bsd.uchicago.edu.ORCID 0000-0002-9936-1599
University of Chicago · USCity of Hope · USUniversity of Illinois Chicago · US

Funding

BASIC RESEARCH TRAINING IN MEDICAL ONCOLOGYT32CA009566 · NCI · UNIVERSITY OF CHICAGO · PI OLUFUNMILAYO F. OLOPADE · 1987 to 2026
$10.5M
Cancer Genetics Professional Education in a Global Community of PracticeR25CA171998 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI KATHLEEN R. BLAZER · 2013 to 2026
$4.3M
Familial Breast CancerR13CA132514 · NCI · UNIVERSITY OF CHICAGO · PI OLOPADE, OLUFUNMILAYO F. · 2008 to 2009
$40k
Conference and Workshop on New Frontiers in diagnosis, screening and management of inherited cancer syndromesR13CA206594 · NCI · UNIVERSITY OF CHICAGO · PI OLOPADE, OLUFUNMILAYO F. · 2016 to 2017
$20k
NCI NIH HHS R13 CA132514NCI NIH HHS R13 CA206594NCI NIH HHS R13CA206594-01NCI NIH HHS R25 CA171998NCI NIH HHS R25CA171998NCI NIH HHS T32 CA009566NCI NIH HHS T32CA009566
6 · The paper itself

Abstract

Comprehensive genomic cancer risk assessment (GCRA) helps patients, family members, and providers make informed choices about cancer screening, surgical and chemotherapeutic risk reduction, and genetically targeted cancer therapies. The increasing availability of multigene panel tests for clinical applications allows testing of well-defined high-risk genes, as well as moderate-risk genes, for which the penetrance and spectrum of cancer risk are less well characterized. Moderate-risk genes are defined as genes that, when altered by a pathogenic variant, confer a 2 to fivefold relative risk of cancer. Two such genes included on many comprehensive cancer panels are the DNA repair genes ATM and CHEK2, best known for moderately increased risk of breast cancer development. However, the impact of screening and preventative interventions and spectrum of cancer risk beyond breast cancer associated with ATM and/or CHEK2 variants remain less well characterized. We convened a large, multidisciplinary, cross-sectional panel of GCRA clinicians to review challenging, peer-submitted cases of patients identified with ATM or CHEK2 variants. This paper summarizes the inter-professional case discussion and recommendations generated during the session, the level of concordance with respect to recommendations between the academic and community clinician participants for each case, and potential barriers to implementing recommended care in various practice settings.

Indexed as

AdultAtaxia Telangiectasia Mutated ProteinsBreast NeoplasmsCheckpoint Kinase 2Cross-Sectional StudiesFemaleGenetic Predisposition to DiseaseHeterozygoteHumansMaleMastectomyMiddle AgedPancreatic NeoplasmsPedigreePhysiciansAtaxia Telangiectasia Mutated ProteinsATM protein, humanCheckpoint Kinase 2CHEK2 protein, humanATMCancer geneticsCHEK2Genomic cancer risk assessment (GCRA)Moderate-risk genePanel test

Identifiers

PMID29445900
PMCPMC6092249
OpenAlexW2793376296

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.