Evidence map›Paper›PMID 29445119›Full record

ArticleHeredity2018

Conservation of a pH-sensitive structure in the C-terminal region of spider silk extends across the entire silk gene family.

Michelle Strickland, Victor Tudorica, Milan Řezáč, Neil R Thomas, Sara L Goodacre

Abstract read
In one paragraph

Article in Heredity, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Domain swap facilitates structural transitions of spider silk protein C-terminal domains.Protein science : a publication of the Protein Society · 2023
    Article
  5. Article
  6. Article
  7. Complexity of Spider Dragline Silk.Biomacromolecules · 2022
    Review
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Michelle StricklandSchool of Life Sciences, University of Nottingham, Nottingham, NG7 2RD, UK. michelle.strickland@nottingham.ac.uk.ORCID 0000-0001-8053-400X
Victor TudoricaCentre for Biomolecular Sciences, School of Chemistry, University of Nottingham, Nottingham, NG7 2RD, UK.
Milan ŘezáčBiodiversity Lab, Crop Research Institute, Drnovská 507, 16106, Prague 6 - Ruzyně, Czechia.
Neil R ThomasCentre for Biomolecular Sciences, School of Chemistry, University of Nottingham, Nottingham, NG7 2RD, UK.
Sara L GoodacreSchool of Life Sciences, University of Nottingham, Nottingham, NG7 2RD, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/M008770/1
6 · The paper itself

Abstract

Spiders produce multiple silks with different physical properties that allow them to occupy a diverse range of ecological niches, including the underwater environment. Despite this functional diversity, past molecular analyses show a high degree of amino acid sequence similarity between C-terminal regions of silk genes that appear to be independent of the physical properties of the resulting silks; instead, this domain is crucial to the formation of silk fibers. Here, we present an analysis of the C-terminal domain of all known types of spider silk and include silk sequences from the spider Argyroneta aquatica, which spins the majority of its silk underwater. Our work indicates that spiders have retained a highly conserved mechanism of silk assembly, despite the extraordinary diversification of species, silk types and applications of silk over 350 million years. Sequence analysis of the silk C-terminal domain across the entire gene family shows the conservation of two uncommon amino acids that are implicated in the formation of a salt bridge, a functional bond essential to protein assembly. This conservation extends to the novel sequences isolated from A. aquatica. This finding is relevant to research regarding the artificial synthesis of spider silk, suggesting that synthesis of all silk types will be possible using a single process.

Indexed as

Hydrogen-Ion ConcentrationModels, MolecularProtein ConformationProtein DomainsAmino Acid SequenceAnimalsConserved SequenceEvolution, MolecularGene Expression ProfilingMultigene FamilyPhylogenySilkSpidersSilk

Identifiers

PMID29445119
PMCPMC5943517

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.