Evidence map›Paper›PMID 29444933›Full record

ArticleEMBO reports2018

PNLDC1, mouse pre-piRNA Trimmer, is required for meiotic and post-meiotic male germ cell development.

Toru Nishimura, Ippei Nagamori, Tsunetoshi Nakatani, Natsuko Izumi, Yukihide Tomari, Satomi Kuramochi-Miyagawa, Toru Nakano

Open access · hybridAbstract read
In one paragraph

Article in EMBO reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 88 citations in OpenAlex.

  1. Review
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  7. Article
  8. Review
  9. Advances in PIWI-piRNA function in female reproduction in mammals.Acta biochimica et biophysica Sinica · 2024
    Review
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  11. Article
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  17. A novel missense variant inJournal of genetics · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Toru NishimuraGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka, Japan.
Ippei NagamoriDepartment of Pathology, Osaka University, Suita, Osaka, Japan.
Tsunetoshi NakataniDepartment of Pathology, Osaka University, Suita, Osaka, Japan.
Natsuko IzumiInstitute of Molecular and Cellular Biosciences, The University of Tokyo, Bunkyo-ku Tokyo, Japan.
Yukihide TomariInstitute of Molecular and Cellular Biosciences, The University of Tokyo, Bunkyo-ku Tokyo, Japan.
Satomi Kuramochi-MiyagawaDepartment of Pathology, Osaka University, Suita, Osaka, Japan smiya@patho.med.osaka-u.ac.jp tnakano@patho.med.osaka-u.ac.jp.ORCID 0000-0003-4396-5868
Toru NakanoGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka, Japan smiya@patho.med.osaka-u.ac.jp tnakano@patho.med.osaka-u.ac.jp.ORCID 0000-0002-4026-652X
The University of Osaka · JPThe University of Tokyo · JPUbe Frontier University · JPJapan Science and Technology Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PIWI-interacting RNAs (piRNAs) are germ cell-specific small RNAs essential for retrotransposon gene silencing and male germ cell development. In piRNA biogenesis, the endonuclease MitoPLD/Zucchini cleaves long, single-stranded RNAs to generate 5' termini of precursor piRNAs (pre-piRNAs) that are consecutively loaded into PIWI-family proteins. Subsequently, these pre-piRNAs are trimmed at their 3'-end by an exonuclease called Trimmer. Recently, poly(A)-specific ribonuclease-like domain-containing 1 (PNLDC1) was identified as the pre-piRNA Trimmer in silkworms. However, the function of PNLDC1 in other species remains unknown. Here, we generate

Indexed as

AnimalsExoribonucleasesGene SilencingGerm CellsMaleMeiosisMiceMitochondrial ProteinsMutationPhospholipase DRetroelementsRibonucleasesRNA, Small InterferingSpermatogenesisTestisExoribonucleasesMitochondrial ProteinsmitoPLD protein, mousePhospholipase DPNLDC1 protein, mouseRetroelementsRibonucleasesRNA, Small InterferingpiRNAPIWIPNLDC1spermatogenesisTrimmer

Identifiers

PMID29444933
PMCPMC5836094
OpenAlexW2786787605

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.