Evidence map›Paper›PMID 29444170›Full record

ArticlePloS one2018

Genotypic and phenotypic characterization of the Sdccag8Tn(sb-Tyr)2161B.CA1C2Ove mouse model.

Katie Weihbrecht, Wesley A Goar, Calvin S Carter, Val C Sheffield, Seongjin Seo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Katie WeihbrechtDepartment of Pediatrics, University of Iowa, Iowa City, lowa, United States of America.
Wesley A GoarDepartment of Pediatrics, University of Iowa, Iowa City, lowa, United States of America.
Calvin S CarterDepartment of Pediatrics, University of Iowa, Iowa City, lowa, United States of America.
Val C SheffieldDepartment of Pediatrics, University of Iowa, Iowa City, lowa, United States of America.
Seongjin SeoDepartment of Ophthalmology and Visual Sciences, University of Iowa, Iowa City, lowa, United States of America.ORCID 0000-0002-7908-3210
University of Iowa · US

Funding

Treatment of a Complex Retinal Degenerative SyndromeR01EY011298 · NEI · UNIVERSITY OF IOWA · PI SHEFFIELD, VAL C. · 1996 to 2017
$7.3M
Interdisciplinary approach to retinal disease gene identificationR01EY017168 · NEI · UNIVERSITY OF IOWA · PI SHEFFIELD, VAL C. · 2007 to 2017
$5.9M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008629 · NIGMS · UNIVERSITY OF IOWA · PI EBERL, DANIEL F · 1997 to 2021
$4.1M
Molecular Pathophysiology of Retinal Degeneration in Bardet-Biedl SyndromeR01EY022616 · NEI · UNIVERSITY OF IOWA · PI SEO, SEONGJIN · 2012 to 2020
$3.1M
Role of Neural Progenitor Cells in the Development of Neonatal HydrocephalusR01NS083543 · NINDS · UNIVERSITY OF IOWA · PI SHEFFIELD, VAL C. · 2013 to 2017
$1.6M
NEI NIH HHS R01 EY011298NEI NIH HHS R01 EY017168NEI NIH HHS R01 EY022616NIGMS NIH HHS T32 GM008629NIH HHS R01EY011298NIH HHS R01EY017168NIH HHS T32GM008629NINDS NIH HHS R01 NS083543
6 · The paper itself

Abstract

Nephronophthisis-related ciliopathies (NPHP-RC) are a group of disorders that present with end-stage renal failure in childhood/adolescence, kidney cysts, retinal degeneration, and cerebellar hypoplasia. One disorder that shares clinical features with NPHP-RC is Bardet-Biedl Syndrome (BBS). Serologically defined colon cancer antigen 8 (SDCCAG8; also known as NPHP10 and BBS16) is an NPHP gene that is also associated with BBS. To better understand the patho-mechanisms of NPHP and BBS caused by loss of SDCCAG8 function, we characterized an SDCCAG8 mouse model (Sdccag8Tn(sb-Tyr)2161B.CA1C2Ove) generated by Sleeping Beauty Transposon (SBT)-mediated insertion mutagenesis. Consistent with the previously reported, independent SDCCAG8 mouse models, our mutant mice display pre-axial polydactyly in their hind limbs. In addition, we report patterning defects in the secondary palate, brain abnormalities, as well as neonatal lethality associated with developmental defects in the lung in our mouse model. The neonatal lethality phenotype is genetic background dependent and rescued by introducing 129S6/SvEvTac background. Genetic modifier(s) responsible for this effect were mapped to a region between SNPs rs3714172 and rs3141832 on chromosome 11. While determining the precise genetic lesion in our mouse model, we found that SBT insertion resulted in a deletion of multiple exons from both Sdccag8 and its neighboring gene Akt3. We ascribe the patterning defects in the limb and the secondary palate as well as lung abnormalities to loss of SDCCAG8, while the developmental defects in the brain are likely due to the loss of AKT3. This mouse model may be useful to study features not observed in other SDCCAG8 models but cautions are needed in interpreting data.

Indexed as

GenotypePhenotypeAnimalsAutoantigensBody PatterningHindlimbMiceMice, Mutant StrainsModels, AnimalMutagenesisNeoplasm ProteinsPalatePolymorphism, Single NucleotideProto-Oncogene Proteins c-aktReverse Transcriptase Polymerase Chain ReactionAkt3 protein, mouseAutoantigensNeoplasm ProteinsProto-Oncogene Proteins c-aktSdccag8 protein, mouse

Identifiers

PMID29444170
PMCPMC5812623
OpenAlexW2790751028

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.