Evidence map›Paper›PMID 29444082›Full record

ArticlePloS one2018

S100B as an antagonist to block the interaction between S100A1 and the RAGE V domain.

Md Imran Khan, Yu-Kai Su, Jinhao Zou, Lee-Wei Yang, Ruey-Hwang Chou, Chin Yu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. S100A12 in Digestive Diseases and Health: A Scoping Review.Gastroenterology research and practice · 2020
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Md Imran KhanNational Tsing Hua University, Chemistry Department, Hsinchu, Taiwan.
Yu-Kai SuNational Tsing Hua University, Chemistry Department, Hsinchu, Taiwan.
Jinhao ZouInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, Taiwan.
Lee-Wei YangInstitute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, Taiwan.
Ruey-Hwang ChouGraduate Institute of Biomedical Sciences, China Medical University, Taichung, Taiwan.
Chin YuNational Tsing Hua University, Chemistry Department, Hsinchu, Taiwan.ORCID 0000-0002-1564-8040
National Tsing Hua University · TWAsia University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ca2+-binding human S100A1 protein is a type of S100 protein. S100A1 is a significant mediator during inflammation when Ca2+ binds to its EF-hand motifs. Receptors for advanced glycation end products (RAGE) correspond to 5 domains: the cytoplasmic, transmembrane, C2, C1, and V domains. The V domain of RAGE is one of the most important target proteins for S100A1. It binds to the hydrophobic surface and triggers signaling transduction cascades that induce cell growth, cell proliferation, and tumorigenesis. We used nuclear magnetic resonance (NMR) spectroscopy to characterize the interaction between S100A1 and the RAGE V domain. We found that S100B could interact with S100A1 via NMR 1H-15N HSQC titrations. We used the HADDOCK program to generate the following two binary complexes based on the NMR titration results: S100A1-RAGE V domain and S100A1-S100B. After overlapping these two complex structures, we found that S100B plays a crucial role in blocking the interaction site between RAGE V domain and S100A1. A cell proliferation assay WST-1 also supported our results. This report could potentially be useful for new protein development for cancer treatment.

Indexed as

Antigens, NeoplasmCalciumHumansHydrophobic and Hydrophilic InteractionsMitogen-Activated Protein KinasesNuclear Magnetic Resonance, BiomolecularProtein BindingS100 Calcium Binding Protein beta SubunitS100 ProteinsSignal TransductionAntigens, NeoplasmCalciumMitogen-Activated Protein KinasesMOK protein, humanS100A1 proteinS100B protein, humanS100 Calcium Binding Protein beta SubunitS100 Proteins

Identifiers

PMID29444082
PMCPMC5812564
OpenAlexW2791362712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.